Gene cucsa_pan_p007332


Sequence ID cucsa_pan_p007332  add to my list
Species Cucumis sativus
Alias No gene alias
Pangenome status Core (3/3)
Length 394aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 394 amino acids

>cucsa_pan_p007332_CUCSA
MGEAKVEESAAKNEAEKKPAAPVPAPAPAAVPVVKDGGAKKEEGGAVTAIYKIDMHCEGC
AKKIKRAVRHVKDVESVKADCGANKLTVIGRMDVVAVKQKLELKTKKKVELISPQPKKDA
PAAAAAAPAAAEKKPEEKKAPEEKPKESTVVLKIRLHCEGCIQKIRRIILKINGVQSVDL
DGVKDLVTVKGTMDVKQLEPYLKDKLKRNVEIVPPKKEEAAGEKKKEESPAPAAAAGGGE
KKKEEAGGGGEKKEKEGGGGEKKEGGGGEKKEKEGGGEKKEGESKPAPAAAPAAAGEGGG
VKPADVVNKFEYYGGYPFQQLYYEAPMQYQSYSMEANPSYYNPNYGYNNHGYDNHGYVDH
RYDVVPMDPHFPHHMRNDQPQMFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP071484 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cucsa_pan_p007332



Represented sequence(s):
CUCSA_ASM407_v2.0
KGN58979
CUCSA_Gy14_v2.0
CsGy3G031070.1
CUCSA_PI183967
evm.model.Chr3.3282
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
MELO3C009355.2.1 orthology 0.0412 1 432 4.66e-151
evm_27.model.AmTr_v1.0_scaffold00072.133 orthology 0.482 3 202 9.75e-63
thecc_pan_p007996 orthology 0.416 2 - -