Gene cucsa_pan_p011897


Sequence ID cucsa_pan_p011897  add to my list
Species Cucumis sativus
Alias No gene alias
Pangenome status Dispensable (2/3)
Length 97aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 97 amino acids

>cucsa_pan_p011897_CUCSA
MEVVDLKVCLHCKSCENSVRKTLCKIKGVKCVETNRALNKITVLGYMDRKIVIKEVRKTG
RKAEVLSSSSYRHPSTPRLKSRRATTAFKCIMPSCFL


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cucsa_pan_p011897



Represented sequence(s):
CUCSA_Gy14_v2.0
CsGy1G030850.1
CUCSA_ASM407_v2.0
KGN66625
Unrepresented genome(s):
CUCSA_PI183967
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cc06_g23640 orthology 1 3 90.5 1.91e-25
Cg4g020120.1 orthology 0.661 2 97.8 6.69e-28
Cm053960.1 orthology 0.726 1 101 2.26e-28
Cs4g04870.1 orthology 0.661 2 101 1.72e-29
thecc_pan_p023685 orthology 0.816 2 93.6 1.48e-26
vitvi_pan_p042652 orthology 1 4 - -