Gene cucsa_pan_p017978


Sequence ID cucsa_pan_p017978  add to my list
Species Cucumis sativus
Alias No gene alias
Pangenome status Core (3/3)
Length 269aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 269 amino acids

>cucsa_pan_p017978_CUCSA
MGEKKNDDTTTAVFKIDIHCEGCANKLRRSVRQIPGVSRVRADWEANKLTVIGKFDPAKL
RDYLADKETKKIDIVSSESKKEKESTKKQDDEKPDKKTEDKKQPKDKEIPVTTATLKVEL
HCQGCIEKIYKVVSRTKGVEDMAIERQKDLVMVKGKMDVKALIENLEEKLKRKVAVVVPK
KDKDEGAKGGDGGDKNKTGGEVAQGGGAMEGNRLDYVAVPVPGYGYGYGYGYGYGNGNGG
FVGQHMPPAQPLISPQMFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP467000 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for cucsa_pan_p017978



Represented sequence(s):
CUCSA_ASM407_v2.0
KGN46869
CUCSA_Gy14_v2.0
CsGy6G011910.1
CUCSA_PI183967
evm.model.Chr6.1178
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
MELO3C026908.2.1 orthology 0.0668 1 399 7.65e-141