Gene evm_27.model.AmTr_v1.0_scaffold00010.206


Sequence ID evm_27.model.AmTr_v1.0_scaffold00010.206  add to my list
Species Amborella trichopoda
Alias No gene alias
Length 160aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 160 amino acids

>evm_27.model.AmTr_v1.0_scaffold00010.206_AMBTC
MAGFLCRTPASTSICMASDHRRVLEPEKSAKLLDVKYSRLVESKRFSSIPSKTPPPKNEG
LRRVKSERSDRKMPEKILRLPQPSDSKRVFQVVVMRVSLHCRGCAGKVKKHISKMEGVTS
FSIDLETKRVTVMGHISPLGVLESVSKVKRAELWSAAATV




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for evm_27.model.AmTr_v1.0_scaffold00010.206



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Bv8_190260_chqz.t1 orthology 0.837 2 123.6 1e-28
PGSC0003DMP400022303 orthology 0.795 4 136.3 1.8e-32
Solyc01g105000.2.1 orthology 0.81 3 134.4 6.6e-32
capan_pan_p019823 orthology 0.841 4 136 1.93e-41
capan_pan_p036114 orthology 0.966 4 - -
capan_pan_p041384 orthology 0.957 4 - -