Gene evm_27.model.AmTr_v1.0_scaffold00110.131


Sequence ID evm_27.model.AmTr_v1.0_scaffold00110.131  add to my list
Species Amborella trichopoda
Alias No gene alias
Length 279aa



Length: 279 amino acids

>evm_27.model.AmTr_v1.0_scaffold00110.131_AMBTC
VILAGLLSYADGGTAAGYVALYLVGWSPLLWSIGYQLFSPERKEVLSLSQPSMQSFIQFI
WFWIRRILNPPIYGTLIGLVIGATPISYFFYPSKGKFLDIHQSSEGFRVLHEGLVLFCQS
IMEASSLLGSATVTVQTIILACAIGPLISDFGLRKGDPYETDKQSGEFNREKGYTIVLDK
HIFWAIICIRLIGMPLAILFLVKGLLHMGLLPMNTILVFTILVLSAMPTAQNLVVMLQLN
PSKAPLVETFANLLLYEYGLALASIPIWTTVFTAVFSRP





Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355
Auxin efflux carrier family
2 GP111951 Unannotated cluster
3 GP122660 Unannotated cluster
4 GP136687 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776
Membrane transport protein Family

IPR004776
Figure 1: IPR domains for evm_27.model.AmTr_v1.0_scaffold00110.131



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba10_g07270.1 orthology 1 4 - -
Oeu046999.1 orthology 1 3 - -
Sspon.02G0011600-1A orthology 1 1 - -
evm_27.model.AmTr_v1.0_scaffold00007.253 ultra-paralogy 0.0882 0 - -
evm_27.model.AmTr_v1.0_scaffold00210.9 ultra-paralogy 0.134 0 - -
maldo_pan_p047466 orthology 1 3 - -
musac_pan_p038561 orthology 1 3 - -