Gene ipotf_pan_p020614
| Sequence ID | ipotf_pan_p020614 add to my list |
|---|---|
| Species | Ipomoea trifida |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 306aa |
Length: 306 amino acids
>ipotf_pan_p020614_IPOTF MGKVTVSGDVMPETLIRKLNKNGKHAELIGEPKENNGERVEDSKGAKRKKGGGQNGNNTN LPPPPPPPLQPKCINLPPPAAMLNPQQMKALQDLMTKLPPRYNVPVNGIPKSVKFDLPES DDVIEGYEEEEEGGMDDVVPVNKTNQPPMVGNGGGAGISMINDRARAAHVTPPNRVALKA APGSNVGPIPQRSTQVGPIPNFQIPTPQHIPATAVHVGGAGGGATVQVGGAAVHAGYYPE APARNPLQPQQPAVAANSYPQPAMYFRTPPAVGYFPPSPLYPSYPYPPPQDNYYSDDENT TGCSVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
No IPR domain.
Represented sequence(s):
IPOTF_Y22
IPOTF_NSP306
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| itb01g18900.t1 | orthology | 0.146 | 1 | 377 | 8.36e-132 |