Gene ipotf_pan_p023152


Sequence ID ipotf_pan_p023152  add to my list
Species Ipomoea trifida
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 248aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 248 amino acids

>ipotf_pan_p023152_IPOTF
MQKPRITEVQVRMDCNGCVQKIKKALHGVNGIYEVYIDFPDQKITIVGRADPEKIVKAIK
KTRKSAVICSHTEQQPNPSEQPPDEAAEEETAKAKDPPPVAPENQPTADEEKHSPETAEI
QTADQTSKPKEDNNNVEEVVHHVIYHYPPHYYGYTQQWNNSQPRAEPPPLPPIYVSHSYN
SYKPSPHVTRYDHSSSPSTYTHYGRSDEHYYTRMAAEDYYHYTDDYHNGNSDDSVFSEEE
NPNSCTIV




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP047778 Unannotated cluster
4 GP077656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for ipotf_pan_p023152



Represented sequence(s):
IPOTF_Y22
Itr.xfSc0000144.14
Unrepresented genome(s):
IPOTF_NSP306


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
PGSC0003DMP400011064 orthology 0.79 4 - -
Solyc01g065690.2.1 orthology 0.809 4 - -
capan_pan_p001422 orthology 0.788 3 156 5.38e-46
ipotf_pan_p022606 ultra-paralogy 0.0518 0 - -
itb04g19450.t2 orthology 0.479 1 - -