Gene ipotf_pan_p023318


Sequence ID ipotf_pan_p023318  add to my list
Species Ipomoea trifida
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 362aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 362 amino acids

>ipotf_pan_p023318_IPOTF
MASHTAAPADHPEPLKHKMWVLKVSIHCEGCKRKVKKILLQVPGVKDIDIDIRQQRVVVT
GDVHADTLIKKLVKSGKNAELWPQMVAPREGIPTAAAAVKKPKELKPESKQEDTCTSGHG
GGQREAKPPGKVAVVIQEPPAKKTEGGSEEPVSGGGGVAKDEGNSVAGTGAGAGDSKAKS
VENLQGAKESKSEGKKPESGGENSTQTPATAEKKDGEAGGNAAGEDRNGGGAENGSTGKT
KKKKGQNGNSSEKISSSAGGPAGTGSQHHETGPHAASAFTNQITPHHPYYGPTPVYAVSY
NTAYPTSSSTTSYYAAPPSNSYAYTYPGPTMEPPPSDLVHPQQPLDSFELFSDENPNGCS
VM




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for ipotf_pan_p023318



Represented sequence(s):
IPOTF_Y22
Itr.Sc0000211.1
Unrepresented genome(s):
IPOTF_NSP306


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AUR62000774-RA orthology 0.792 3 - -
AUR62005195-RA orthology 0.807 3 - -
Bv4_075740_onqg.t1 orthology 0.758 3 128 4.83e-34
itb15g13030.t1 orthology 0.039 1 - -