Gene ipotf_pan_p025070


Sequence ID ipotf_pan_p025070  add to my list
Species Ipomoea trifida
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 224aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 224 amino acids

>ipotf_pan_p025070_IPOTF
MLLPSNGPLSYPNLPVYYSVGPRYEFSGVQGISPFVENEKYMRLVQKPRATFREYASSPP
RRSGKALLFSGGCSAAASLALEPIRKGSGDDGRREKARKKPPARRSSKTLLFSGGCSAAS
LALAPVRKGSGGDGRREKTRKPPAAASTLSSSNTHHVFQVVVMRVSLHCQGCASKVKKHL
SKMEGVTSFSIDLENKKVTVMGNVSPTGVLESVSKVKRAEFWPC




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for ipotf_pan_p025070



Represented sequence(s):
IPOTF_Y22
Itr.xfSc0000003.53
Unrepresented genome(s):
IPOTF_NSP306


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
itb01g02110.t1 orthology 0.0563 1 - -