Gene itb01g28440.t1
| Sequence ID | itb01g28440.t1 add to my list | ||
|---|---|---|---|
| Species | Ipomoea triloba | ||
| Alias | No gene alias | ||
| Length | 296aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 296 amino acids
>itb01g28440.t1_IPOTR MAASEPPPDEQPPPQFPPPLPYKTWVLKVSIHCQACKRKVKKVLQSIEGVYITDIDEKQH KVTVTGNVEADALIKKLIRSGKNAEMWHEKSSFKEKKSGNPNQRSEGAKSNENSDEDDDN NEEEDDGKAGENNVDAQKQKTGGPSVRFDVPPPGNAAPGGAPPKKKKKKKKKKSSGAAAS AASNNAPPGNAGPETSRMGPPPLHGVDPGSLGHPYAPAPAHQYPPSYGAPQQGYVVSYNA APHPGGGGGGAPTYYYAPSSPYTYAYTRAEVHSMRCRPLDSFEILSDENPNACYIM
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for itb01g28440.t1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| HanXRQChr03g0080771 | orthology | 0.784 | 2 | - | - |
| HanXRQChr13g0411351 | orthology | 0.782 | 2 | 124.8 | 1.5e-28 |
| ipotf_pan_p002253 | orthology | 0.0176 | 1 | 441 | 1.53e-157 |