Gene maize_pan_p020073


Sequence ID maize_pan_p020073  add to my list
Species Zea mays
Alias No gene alias
Pangenome status Core (4/4)
Length 354aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 354 amino acids

>maize_pan_p020073_MAIZE
MAAAEEGPEPLRYQTLALRVSIHCEGCKKKVKKVLHSIEGVYKTDIDTQQQKVVVIGNVS
ADALVKKLLKSGKHAEPWPEPAPAPPAADSPPGPDGSPGSAGKKKKKKKGNKSPEAANNK
PADPAPAPAPAPAEGNGGPNPPEQHDKADGGASCDEASDGEQDKPEAGGGGGNGSPDAGE
ANEGGKVAPSAMTPHGPQPIAAATNSNGGGGGGGGGGKKKGKKGGHGNANRDGAGPIVEV
QPPPDAPTKPAAGNSGPLTVIDAGPYPPPAAAAMSYPGYYAAGVHPPAYVMSYSTAHPSS
ALRSSAYYHPMAGAPYTPGSGGGYFYSTAPAPAPAAPGSYYMFSEENANACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maize_pan_p020073



Represented sequence(s):
MAIZE_PH207_v1.0
Zm00008a024010_T01
MAIZE_CML247_v1.0
Zm00006a025000
MAIZE_Mo17_v1.0
ZmMO1706t027223
MAIZE_B73_v4.0
Zm00001d035783
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Sspon.07G0012960-1A orthology 0.0811 1 - -
Sspon.07G0012960-2B orthology 0.0851 1 - -
Sspon.07G0012960-3D orthology 0.0834 1 419 1.83e-146
cocnu_pan_p024954 orthology 0.707 3 - -
sorbi_pan_p019648 orthology 0.097 2 363 6.54e-125