Gene maize_pan_p037219


Sequence ID maize_pan_p037219  add to my list
Species Zea mays
Alias No gene alias
Pangenome status Specific (1/4)
Length 258aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 258 amino acids

>maize_pan_p037219_MAIZE
MQQQSALKERIEARAKKPVQIVSAGAGSPKKDKEKKADGGEKNAAKENGGGDAEKKKKAD
KTKGGGDGGEKKADKKKGGGDGGEKKADKKKGGGGGDKKADKEKGTGKTKEEEEEEEEKP
KEPKEETVTLKIQLHCDGCMDRIKRRICKIKGVKDVAFDAAKDLVKVTGTMDAAVLPAYL
REKLSRDVEVVAPGKKDGGGGGDKKGKGEGDGAEKKNKKKDGGAEGKNDRAAAASASASV
APIPLADAAGMYLMPPHY




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP467000 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maize_pan_p037219



Represented sequence(s):
MAIZE_PH207_v1.0
Zm00008a020099_T01
Unrepresented genome(s):
MAIZE_B73_v4.0
MAIZE_CML247_v1.0
MAIZE_Mo17_v1.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Sspon.01G0003000-1P orthology 0.162 2 - -
Sspon.01G0003000-3D orthology 0.164 2 - -
Sspon.01G0018780-1A orthology 0.161 2 - -
Sspon.01G0018780-2B orthology 0.163 2 - -
maize_pan_p002998 ultra-paralogy 0.167 0 - -
maize_pan_p022093 ultra-paralogy 0.0417 0 - -
sorbi_pan_p008991 orthology 0.155 2 - -