Gene maize_pan_p043327


Sequence ID maize_pan_p043327  add to my list
Species Zea mays
Alias No gene alias
Pangenome status Specific (1/4)
Length 123aa



Length: 123 amino acids

>maize_pan_p043327_MAIZE
MVLPHKAIASASPMSHVPVVPRTHRHDDKKGWQQEEEQQRKAVVVGNTGGLVSPAGSSRY
LLTGRFAATEEIQEVESAPAVDGKPKREEAACAGKVKKHLSKMEGVTSFNIDFCLREDDN
FTF




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain

IPR006121
Figure 1: IPR domains for maize_pan_p043327



Represented sequence(s):
MAIZE_CML247_v1.0
Zm00006a026816
Unrepresented genome(s):
MAIZE_B73_v4.0
MAIZE_Mo17_v1.0
MAIZE_PH207_v1.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Sspon.01G0031200-1A orthology 0.361 2 - -
Sspon.01G0031200-1P orthology 0.361 2 - -
Sspon.01G0031200-2B orthology 0.36 2 - -
Sspon.01G0031200-3D orthology 0.365 2 - -
maize_pan_p014397 ultra-paralogy 0.0491 0 - -
maize_pan_p019962 ultra-paralogy 0.279 0 - -
maize_pan_p032298 ultra-paralogy 0.363 0 - -
sorbi_pan_p010670 orthology 0.357 2 - -