Gene maldo_pan_p000046


Sequence ID maldo_pan_p000046  add to my list
Species Malus domestica
Alias No gene alias
Pangenome status Core (3/3)
Length 301aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 301 amino acids

>maldo_pan_p000046_MALDO
MKMKGIDIFCASQASTAICMNMDHQASSSIVQLGGRALDRHNPIIQDARRSTSSRTLPIA
PCSSQSPINPKAYHQLPKNKKKATSSSLRPSTKSSSKENDQKRKSTSNIFHGKLDENVKK
FSSVLSESVVRKSSANPIDLITPPGSSRSLLSDTVIFDGLSDYDPVLALVPVGQKKNAVK
IITENKSTTSSIGSSSSSLTKDKKPPTPPPLPPPSSQVVVLMVSLHCKGCVGKLRKHLSR
MEGVTSFNIDFAAKKVTVTGDVTPLSVLASVSKVKNAQFWPTVSSASPASTPCPTKLEAK
K


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maldo_pan_p000046



Represented sequence(s):
MALDO_GDDH13_v1.1
MD12G1133800
MALDO_Borkh_v3.0.a1
MDP0000140002
MDP0000521910
MALDO_HFTH1
HF04715-RA
Download sequences FASTA

  1. 2. 3. 4.
1. MDP0000521910 0.00 0.67 1.34 2.01
2. MDP0000140002 0.67 0.00 1.00 1.68
3. MD12G1133800 1.34 1.00 0.00 2.01
4. HF04715-RA 2.01 1.68 2.01 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg6g003710.1 orthology 0.486 4 227 1.84e-73
Cm254260.1 orthology 0.499 4 - -
Cs6g05460.1 orthology 0.478 3 228 1e-73
FvH4_6g14630.1 orthology 0.242 1 - -
maldo_pan_p012786 ultra-paralogy 0.0813 0 - -