Gene maldo_pan_p017357


Sequence ID maldo_pan_p017357  add to my list
Species Malus domestica
Alias No gene alias
Pangenome status Core (3/3)
Length 445aa



Length: 445 amino acids

>maldo_pan_p017357_MALDO
MGVSNKESRLLNEDLMEEDDFEDVGSGSESEAESEEEGDVKLEDPSKKAIYNRDGIMDKL
GDISWPENAGWVHKLSVDIDQEQKVDVNDDLTRELAFYTQALEGTRKAFEKLQSMGLPFL
RPEDYYAEMVKSDSHMERVKSRLLVEKKKIEEADERRKARESKKLSKEIQAQKLKERAKQ
KKEDIESVKKWRKQRQQSGFAGGDKGSELDLAFEDAKPFERSNKKRPFVAPGDRSGGKAR
QGGKPTGKKPKKREIKDSKFGYGGRKGSKKQNMAETTNDLRGFNKDSLTSGNKKRKSPSS
YPVQSNPTRCLTMLDSTLDLLTQAASNSLYVFCFCNLIIVMILVGSKPCSYVDQESVSTV
TSSYKTRISNDHKQVEDDKCEQEGTMFKSPIVFGQVANPEKKLATAGEDNGSGDHHNESK
ECDNEDELRRRVEEFIEKNRWKLSY


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Unknown function duf1138 family
GP002478		 Unknown function duf1138 family
2 GP018276 Unannotated cluster
3 GP042981 Unannotated cluster
4 GP544995 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Eukaryotic rRNA processing
IPR008610 		Eukaryotic rRNA processing Family

IPR008610
Figure 1: IPR domains for maldo_pan_p017357



Represented sequence(s):
MALDO_GDDH13_v1.1
MD07G1257700
MALDO_Borkh_v3.0.a1
MDP0000321796
MALDO_HFTH1
HF25685-RA
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg9g025540.1 orthology 0.447 4 - -
Cg9g025620.1 orthology 0.47 6 - -
Cm168920.1 orthology 0.48 5 - -
Cm169010.1 orthology 0.461 4 - -
Cs9g15980.1 orthology 0.446 4 - -
Cs9g16070.1 orthology 0.464 4 - -
FvH4_7g28160.1 orthology 0.256 1 346 8.13e-118
MELO3C005417.2.1 orthology 0.41 4 - -
Manes.06G137800.1 orthology 0.458 4 - -
cucsa_pan_p004862 orthology 0.434 4 - -
maldo_pan_p003250 ultra-paralogy 0.057 0 - -
orange1.1t05624.1 orthology 0.47 6 - -
thecc_pan_p002991 orthology 0.396 3 - -