Gene maldo_pan_p018618


Sequence ID maldo_pan_p018618  add to my list
Species Malus domestica
Alias No gene alias
Pangenome status Core (3/3)
Length 361aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 361 amino acids

>maldo_pan_p018618_MALDO
MGEKKESPKNDGEKKPTDAAPKKDDGLNIFIFKTDIHCEGCAKKIKRAVKNFEGVEQVKT
DSAANKLTVTGKVDPAGLKEKLEQKIKKKVDLVSPQPKKDGGGGGGGDKKPAADGKAEKK
GEEKKPADNKKPADDKKAAEDKKAKEAPKESAVVLKIRLHCDGCMQKMKSKISKFKGVNN
VSFDASKDLVTVKGFMDVKELVPYLKEKFRRAVEVVPPKKDDSGAADKKPKDGGGDKKEK
EGAGGDKKEKEGGGEKKDKAVAAGDGEKKEVVAAAGGGGGGGAPKMEMSKMEYNGYPYPP
PSYYWYDEGHVYNHNKFVMEAQAHQAHISQGSSSHGYAVPMEHYPAPQMFSDENPNGCSV
M


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP071484 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maldo_pan_p018618



Represented sequence(s):
MALDO_GDDH13_v1.1
MD12G1113000
MALDO_Borkh_v3.0.a1
MDP0000166168
MALDO_HFTH1
HF04887-RA
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
CgUng002500.1 orthology 0.533 7 257 4.55e-84
CgUng019980.1 orthology 0.533 7 - -
Cm060230.1 orthology 0.535 5 251 1.95e-81
FvH4_6g16410.1 orthology 0.357 1 333 2.12e-113
MELO3C024466.2.1 orthology 0.59 3 218 3.74e-68
Manes.08G010600.1 orthology 0.633 4 224 1.02e-70
Manes.09G066300.1 orthology 0.66 4 - -
cucsa_pan_p001888 orthology 0.601 3 217 5.11e-68
maldo_pan_p021518 ultra-paralogy 0.101 0 - -
orange1.1t00956.1 orthology 0.535 6 241 1.45e-77