Gene maldo_pan_p021518


Sequence ID maldo_pan_p021518  add to my list
Species Malus domestica
Alias No gene alias
Pangenome status Core (3/3)
Length 350aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 350 amino acids

>maldo_pan_p021518_MALDO
MGEEKEAPKNDGEKKPADAAPKKDDGVVTVVLKTDIHCEGCAKKIKRAVKKFEGVEQVKT
DSAANILTVTGKVNPAGLKEKLEQKIKKKIDLVSPQPKKDGGGGGGDKKPAAEGKAEKKD
DEKKPADEKKPAEDKKPIEAPKENSVVLKIRLHCEGCMHKMKSKISKFKGVNSVSFDAPK
DLVMVKGFMDVKELVPYLKEKFRRAVEVVPPKKDDGGAADKKSKDGGGDKKEKEAAGGDK
KEKDGGGEKKDKAVAAGDGAAAGGGGGGGGGAPKMEVSKREYNGYPYPPPSYYWYDEGHV
YNHNKFVMEAQAHQAHVSQGSSSHGYAVPMEHYPAPQMFSDENPNGCSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP071484 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maldo_pan_p021518



Represented sequence(s):
MALDO_HFTH1
HF01535-RA
MALDO_Borkh_v3.0.a1
MDP0000148399
MALDO_GDDH13_v1.1
MD04G1093300
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
CgUng002500.1 orthology 0.547 7 - -
CgUng019980.1 orthology 0.547 7 - -
Cm060230.1 orthology 0.549 5 - -
FvH4_6g16410.1 orthology 0.371 1 - -
MELO3C024466.2.1 orthology 0.604 3 - -
Manes.08G010600.1 orthology 0.647 4 - -
Manes.09G066300.1 orthology 0.673 4 - -
cucsa_pan_p001888 orthology 0.615 3 - -
maldo_pan_p018618 ultra-paralogy 0.101 0 - -
orange1.1t00956.1 orthology 0.549 6 - -