Gene maldo_pan_p022588


Sequence ID maldo_pan_p022588  add to my list
Species Malus domestica
Alias No gene alias
Pangenome status Core (3/3)
Length 148aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 148 amino acids

>maldo_pan_p022588_MALDO
MGALDYLSNFCTVTSTRSKRKAMQTVEIKVKMDCDGCERRVKHAVTSMKGVKTVEVNRKQ
SRVTVSGYVEPNKVLKRVKSTGKKRAEFWPYIDQHLVRYPYASGVYDWRAPKGYVRNVVQ
AFPASINAPEENMVTLFSDDNVNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463678 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for maldo_pan_p022588



Represented sequence(s):
MALDO_GDDH13_v1.1
MD09G1260500
MALDO_HFTH1
HF36840-RA
MALDO_Borkh_v3.0.a1
MDP0000898407
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Cg6g018770.1 orthology 0.106 2 260 5.37e-91
Cm050050.1 orthology 0.106 2 260 9.04e-91
Cs6g17860.1 orthology 0.106 2 260 5.85e-91
Manes.01G115000.1 orthology 0.208 2 252 7.2e-88
Manes.02G074200.1 orthology 0.191 2 - -
thecc_pan_p003496 orthology 0.166 3 255 6.95e-89