Gene maldo_pan_p027373
| Sequence ID | maldo_pan_p027373 add to my list | ||
|---|---|---|---|
| Species | Malus domestica | ||
| Alias | No gene alias | ||
| Pangenome status | Core (3/3) | ||
| Length | 150aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 150 amino acids
>maldo_pan_p027373_MALDO MGIQGTLEYLSDVLSSAKKGKKKKQMQTVAVKIRMDCEGCARKVKNVLSGVKGAKSVDVD LKQQKATVTGYVEAKKVLKAAQSTKKKCELWPYVPYNLVAHPYISQAYDKKAPPNMVRKV ADTSNITETAVDDRYIVMFSDDNPNACSVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
| 3 | GP040065 | Unannotated cluster |
| 4 | GP463617 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for maldo_pan_p027373
Represented sequence(s):
MALDO_HFTH1
MALDO_GDDH13_v1.1
MALDO_Borkh_v3.0.a1
| 1. | 2. | 3. | 4. | 5. | |
|---|---|---|---|---|---|
| 1. MDP0000421303 | 0.00 | 3.42 | 2.04 | 4.79 | 3.42 |
| 2. MDP0000180132 | 3.42 | 0.00 | 1.35 | 5.49 | 1.34 |
| 3. MD08G1176900 | 2.04 | 1.35 | 0.00 | 4.11 | 1.35 |
| 4. HF44457-RA | 4.79 | 5.49 | 4.11 | 0.00 | 5.49 |
| 5. HF07096-RA | 3.42 | 1.34 | 1.35 | 5.49 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| cajca.ICPL87119.gnm1.ann1.C.cajan_25723.1 | orthology | 0.197 | 3 | 242 | 7.59e-84 |
| maldo_pan_p035900 | ultra-paralogy | 0.274 | 0 | - | - |
| maldo_pan_p039810 | ultra-paralogy | 0.0307 | 0 | - | - |
| maldo_pan_p054037 | ultra-paralogy | 0.0493 | 0 | - | - |
| phavu.G19833.gnm2.ann1.Phvul.009G027600.1 | orthology | 0.187 | 3 | 251 | 2.29e-87 |
| soybn_pan_p021996 | orthology | 0.207 | 2 | 241 | 3.42e-83 |