Gene maldo_pan_p033106
| Sequence ID | maldo_pan_p033106 add to my list | ||
|---|---|---|---|
| Species | Malus domestica | ||
| Alias | No gene alias | ||
| Pangenome status | Core (3/3) | ||
| Length | 389aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 389 amino acids
>maldo_pan_p033106_MALDO MTKDDDFKLLKIQTCILKVNIHCDGCKQKVKKLLQRIEGVYQVKIDSDQQKVTVSGSVDS ATLIKKLLRAGKHAEIWSQKSNNQSQKGNNNCIKDDKNNNNNKGQKQGILKNFEAFKNQQ KFPSFSSEEDDDFLDDEEESEEDKLRFIRGMLRQQQQQQANDANNANAKRNAGVINAAAA APNNVKMMNNIVESVNPGKKGGPPNQNMKANPGGIDPKTMAALKLNINNGEAKRGNMNDL SAMMNLAGFHGNAAANAAALEANPNVLGGFQAQANPNAAGFPGGGYTTGQIGQQHPSSIL MNPNGYTHPSQMMNMQARQAAMQQQPQMMYHRSPLVPPSTGYHNYYPSPGPTFSPTAAAY PYGGEPSYGSNNTAAHMFSDENTSSCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for maldo_pan_p033106
Represented sequence(s):
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg2g033940.2 | orthology | 0.353 | 4 | - | - |
| Cm053230.1 | orthology | 0.358 | 5 | - | - |
| FvH4_4g32260.1 | orthology | 0.353 | 1 | 341 | 4.78e-115 |
| Manes.15G126600.1 | orthology | 0.427 | 4 | 327 | 8.38e-110 |
| Manes.17G075400.1 | orthology | 0.415 | 4 | - | - |
| cajca.ICPL87119.gnm1.ann1.C.cajan_07848.1 | orthology | 0.483 | 5 | 327 | 1.21e-109 |
| cicar_pan_p014991 | orthology | 0.489 | 5 | 237 | 5.14e-75 |
| maldo_pan_p009716 | ultra-paralogy | 0.0834 | 0 | - | - |
| medtr_pan_p032193 | orthology | 0.498 | 5 | 315 | 3.09e-105 |
| orange1.1t04788.1 | orthology | 0.36 | 5 | 295 | 3.79e-97 |
| phavu.G19833.gnm2.ann1.Phvul.007G038000.1 | orthology | 0.493 | 6 | 295 | 1.98e-97 |
| soybn_pan_p012384 | orthology | 0.462 | 6 | 302 | 9.72e-100 |
| soybn_pan_p023139 | orthology | 0.456 | 6 | - | - |
| thecc_pan_p016247 | orthology | 0.402 | 4 | 335 | 3.12e-113 |
| vitvi_pan_p018179 | orthology | 0.359 | 3 | 330 | 3.07e-111 |
| vitvi_pan_p040075 | orthology | 0.4 | 3 | - | - |