Gene medtr_pan_p001134
| Sequence ID | medtr_pan_p001134 add to my list |
|---|---|
| Species | Medicago truncatula |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 421aa |
Length: 421 amino acids
>medtr_pan_p001134_MEDTR MGFVQLLEVASMPVIQVLLVSALGAFMATQYFNNLLSPDFRKSLNKVVFFIFTPSLIFSS FAKSVSLQDMISWWFMPVNVGLTFLIGGILGWLLVKLLRPNLKVEGLIIAACSSGNMGNL PIVIIPAICDEKGGPFGARDVCRSNALSYASFSMALGGIFVWTYTFQTIRSSSLRFKALE AAEILKAPNKDLEGNVETPLLKGKDDENAVIEVLPSSYIEDSESQIVNEQDQSHESKKEK QSFFKRIIEVVTHLLAELISPPAISIFFGFLFGAVAWLRKLIIGDNAPFRVIQSTLELLG NGTIPCITLLLGGNLTAGLKSSSVKPLTLICIIITRLFLLPVIGLFIVKAAASYGFLPVD PLFQYTLVMQYAMPPAMNISTMAQLFDVGNEECSVILLWTYSAAAIALTAWSTFLLWLLS Y
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP463648 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for medtr_pan_p001134
Represented sequence(s):
MEDTR_A17_r5.0
MEDTR_Mt4.0v2
| 1. | 2. | 3. | 4. | |
|---|---|---|---|---|
| 1. MtrunA17_Chr5g0407321 | 0.00 | 8.02 | -0.00 | 8.02 |
| 2. MtrunA17_Chr5g0407291 | 8.02 | 0.00 | 8.02 | -0.00 |
| 3. Medtr5g024640.1 | -0.00 | 8.02 | 0.00 | 8.02 |
| 4. Medtr5g024580.1 | 8.02 | -0.00 | 8.02 | 0.00 |