Gene medtr_pan_p010037
| Sequence ID | medtr_pan_p010037 add to my list | ||
|---|---|---|---|
| Species | Medicago truncatula | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 494aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 494 amino acids
>medtr_pan_p010037_MEDTR MSKEEILKIQKSVLKVNIHCDGCKQKVKKILQKIDGVFATEIDAEQGKVTVSGNVDPNVL IKKLAKSGKHAELWGAPKANNNNNNQNNIPNQMKNMHIDNGKGGGGNNNNKGQKGPGNNQ NQPKGGSQQGQNPQQQQLQQQLQQLQQLQHIKGFGDLKVPQFKDMNMKMPPPNQNTNMKG VKFNLPEEYDDFSDDELDEFDDDEYSDEEFDDEMEHPLNKMKLPMGGNGPAHMMMNAQKG VGSGGGNGKKGGAGPVPVQVHGLGGGKKGGGGGGGNNQSQNQGGGNKNNGGKNGGGMPEG KNGNKNVGGGGGGNGGIPNNNVGKKVNGMGESGVQGMINNGLPNMGGGHPNVGHMVSNNM SGMPMGGGGAMGNNMAMMSQMGGNMPAVQGLPAAAMNGGGGGGGGVGGGYGGPEMMMGGN PYQQQQYMAAMMNQQRAIPAGGNDRFQPMIYARPPMAVNYMYPPPYSYPPPPQHPHDPYS NFFNDENTSSCSVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for medtr_pan_p010037
Represented sequence(s):
MEDTR_Mt4.0v2
MEDTR_A17_r5.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg9g004610.1 | orthology | 0.487 | 7 | 231 | 1.06e-69 |
| Cm080580.1 | orthology | 0.498 | 7 | 234 | 9.84e-71 |
| Cs9g06110.1 | orthology | 0.492 | 6 | 234 | 1.05e-70 |
| FvH4_4g14520.1 | orthology | 0.504 | 6 | 196 | 1.61e-56 |
| MELO3C006564.2.1 | orthology | 0.501 | 3 | - | - |
| Manes.03G184400.1 | orthology | 0.492 | 5 | - | - |
| Manes.15G023400.1 | orthology | 0.495 | 5 | 251 | 1.64e-77 |
| cicar_pan_p023752 | orthology | 0.11 | 1 | 270 | 2.12e-84 |
| cucsa_pan_p014828 | orthology | 0.514 | 3 | - | - |
| maldo_pan_p033071 | orthology | 0.473 | 6 | 215 | 2.05e-63 |
| thecc_pan_p006423 | orthology | 0.482 | 5 | 216 | 2.51e-64 |