Gene medtr_pan_p011734


Sequence ID medtr_pan_p011734  add to my list
Species Medicago truncatula
Alias No gene alias
Pangenome status Core (2/2)
Length 343aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 343 amino acids

>medtr_pan_p011734_MEDTR
MSQKKKNNAQNDTKQNNETQKKHNNNNNENKNETQKKQNNNTNNIINNNNNKKNENNKNN
ETKPTNVILKVDMHCEGCSSKIVKFIQGFEALNLLIEGFEKLDIGNGGKLTVTGTVDAGK
LRDNLTIKTKKKVDFISPVPKKDKENKSENENKNKQEDKKPKEPPVTTAVLKLELHCQGC
TEKIRKTVLKTKGVQHVTIDKEKEIVTVKGTMDMKVLVEKLKKRFKRKVEVVPAKKEKEK
EKEKENEKVKEKGENDGGNKKNNQKGGEGGGGGGKKKGEGNGGENIAKKEVLTQPSYGYG
NGYGYGGFFGFDEGYNYGQVQMMHMQEAPQMFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP467000 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for medtr_pan_p011734



Represented sequence(s):
MEDTR_A17_r5.0
MtrunA17_Chr2g0327311
MEDTR_Mt4.0v2
Medtr2g095480.1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AT5G60800.2 orthology 0.892 3 - -
brana_pan_p000516 orthology 0.992 4 - -
brana_pan_p055950 orthology 0.953 4 - -
brana_pan_p067841 orthology 0.956 4 - -
braol_pan_p002717 orthology 1 4 - -
braol_pan_p017567 orthology 0.992 4 - -
braol_pan_p040048 orthology 0.953 4 - -
brarr_pan_p004266 orthology 0.976 3 - -
brarr_pan_p006703 orthology 0.959 4 - -
brarr_pan_p008731 orthology 1 4 - -
brarr_pan_p020733 orthology 1 4 - -
cicar_pan_p020480 orthology 0.596 1 205 1.01e-64