Gene medtr_pan_p023169
Sequence ID | medtr_pan_p023169 add to my list | ||
---|---|---|---|
Species | Medicago truncatula | ||
Alias | No gene alias | ||
Pangenome status | Core (2/2) | ||
Length | 558aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 558 amino acids
>medtr_pan_p023169_MEDTR MVLCMCIYAYAISNKKCVLKVNMHCDGCKKKVKKTLQKIDGVYTIEIDIEQGKVIVAGNI DPDVLIKKLAKSKKHAELWCAPTENNNNNNHNNMANQMKNIQIDTGKGGGENNNNNGQKD PINNQNQPKGGGQQEQNPQQQLQQLQQMKGLEDLKGTQFKDMNMMMPPPNQNPNMKGVKV NLPKEDDAFTDDEFDDDDDYSDEEFDYEIENTLNKMKLSMGSNGPAHMMMNAQKISAGNG GGIEIKGGGGSVGGPMPVQVHSLAGGNGNGGKKGGGGEGGNNQIQNQGGMPEGKNGNKNV GGGGGGIPNNNVGKKVNGMGESGVQGMINNGLPNMGGGHPNACHIDGNMSGMVMGGGAME NNLPMMGQMGGNMPAVSGIPEVAINDNGGRGGGVGGGYGGPEVMMGGNPYHQQHQHMAAM MNQQRAIPAGGYDILQPMMHARPPMAVNYMYPPPYSYPPPPQYPHDQYSNYFNDENTSNC TVIKLGKSPKTTMVAKYIPPPINNGTKEKVKAYNTISLLSLSRYTFPLSVHILTNASHFS SFSLSLMTTHHFSLHISL
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP023608 | Unannotated cluster |
3 | GP040483 | Unannotated cluster |
4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for medtr_pan_p023169
Represented sequence(s):
MEDTR_A17_r5.0
MEDTR_Mt4.0v2
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Cg9g004610.1 | orthology | 0.902 | 6 | - | - |
Cm080580.1 | orthology | 0.913 | 6 | - | - |
Cs9g06110.1 | orthology | 0.907 | 5 | - | - |
FvH4_4g14520.1 | orthology | 0.919 | 5 | - | - |
MELO3C006564.2.1 | orthology | 0.916 | 2 | - | - |
Manes.03G184400.1 | orthology | 0.907 | 4 | - | - |
Manes.15G023400.1 | orthology | 0.91 | 4 | - | - |
cucsa_pan_p014828 | orthology | 0.929 | 2 | - | - |
maldo_pan_p033071 | orthology | 0.888 | 5 | - | - |
thecc_pan_p006423 | orthology | 0.897 | 4 | - | - |