Gene medtr_pan_p026239
| Sequence ID | medtr_pan_p026239 add to my list | ||
|---|---|---|---|
| Species | Medicago truncatula | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 577aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 577 amino acids
>medtr_pan_p026239_MEDTR MSKQDMMKIQNCLLKVNIHCEGCEQKVKKLLQKIEGVYSVNIDAEQGKVLVTGDVDPAKL LKKLKSSGKHAELWGGQKAMMINQNQNFQQQQPQFKNMQIDNNKGGKNNKPQNQKGQKGG VQVAQFQNPKGGKDMKVPNKSQKHVNFDLSEEEFDESDADFDDYDDEDDFDEDEEEEFGH GHGHGQGPQGNGFGQHPMHNNKMMMAMMQNQNGRGPQLGPGGGMMMNGPAAMNIPKGGGG NYAKAKKGDIMDLPMQMHMKGKSGNYGEVKNGNGGGKKGGDDGGKKNKGEKQKGGGGDWG DEKNSSKKKNGKGKNGGGGFLVKFLGLGKKSKKGGGAADTTNKKKNNGGGGNSNNSKGKD GKKGEKLDKVEFDFQDFDITPHGKSGKGGNGNGNGKGAPAKGNANNGHGSNNNGNGGHMG PMGQMGAMNQMAAMNRMGPMGQMGSMDQMRSMPAVQGLPAGAAAAAMNGGYYQGMQQMQP NPYHQQQQQHQQQQQQQQYMAMMMQQQQQQQMQQQLQQQQMQQGNMNNMYPQHMMYGGGR PHPSMNYMGPPPMPSHPMADPITHVFSDENTESCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP083979 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for medtr_pan_p026239
Represented sequence(s):
MEDTR_Mt4.0v2
MEDTR_A17_r5.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| CgUng002530.2 | orthology | 1 | 5 | - | - |
| Cm060200.2 | orthology | 1 | 5 | - | - |
| MELO3C015336.2.1 | orthology | 0.798 | 4 | - | - |
| XP_019703834.1 | orthology | 1 | 4 | - | - |
| cicar_pan_p020684 | orthology | 0.161 | 1 | 383 | 5.33e-127 |
| cocnu_pan_p025153 | orthology | 1 | 3 | - | - |
| cocnu_pan_p029889 | orthology | 1 | 4 | - | - |
| cucsa_pan_p005094 | orthology | 0.788 | 4 | 125 | 1.44e-30 |
| orange1.1t04018.1 | orthology | 1 | 4 | - | - |