Gene medtr_pan_p030239
| Sequence ID | medtr_pan_p030239 add to my list | ||
|---|---|---|---|
| Species | Medicago truncatula | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 302aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 302 amino acids
>medtr_pan_p030239_MEDTR MGEEEKKTEEPKKKEETKPEETKDEAAVPAPPPAEILLKVFMHCESCARKVRRSLKDFPG VEEVITDCKSHTVVVKGEKAEPLKVLERVQKKSHRKVELLSPIPIAPEEEKPAEEEKAAP EEEKKDEPQIVITVLKVHMHCEACAEEIKKRILKMNGVELVETDLKNSEVSVKGVYDPAM LVEYVYKRIGKHAVIMKEEKVDVEAKAEEEKKEEKVEEVAKKKEEGEGEAKPQEEEKEAE ETNVEEEMKKYQYYYNPSMNLYAYPEIGYPAYPAAYYQAYPPPPPPAPQMFSDENPNACS VM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP040674 | Unannotated cluster |
| 4 | GP070448 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for medtr_pan_p030239
Represented sequence(s):
MEDTR_A17_r5.0
MEDTR_Mt4.0v2
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| cicar_pan_p021928 | orthology | 0.375 | 1 | 280 | 1.01e-94 |
| medtr_pan_p007423 | ultra-paralogy | 0.185 | 0 | - | - |
| medtr_pan_p017806 | ultra-paralogy | 0.207 | 0 | - | - |