Gene musac_pan_p001588


Sequence ID musac_pan_p001588  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Dispensable (3/4)
Length 142aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 142 amino acids

>musac_pan_p001588_MUSAC
MTIVEMCVHMDCAGCESKIRKALQKLEGVDNVEIDMGSQKVTVTGYVDQKKVLKAVRRTG
RRAVLWPYQYSAEQHHTFNHQYHQHHPALAQAGVSGPSSSYNYYKHGYDDSRIHGYYQQP
AMTGNRTGDIFSDENPNACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p001588



Represented sequence(s):
MUSAC_Macze1
Mazeb_scaffold568_t000020
MUSAC_Macma2
Ma00_t00180.1
MUSAC_Macbu1
Mabur_Contig2879_t000010
Unrepresented genome(s):
MUSAC_Macba2
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU3Hr1G072940.2 orthology 0.547 4 157 2.25e-50
Mba03_g16740.1 orthology 0.0214 1 219 1.98e-75
ORGLA01G0256400.1 orthology 0.456 3 171 1.46e-55
Sspon.03G0031090-1B orthology 0.519 3 - -
Sspon.03G0031090-2C orthology 0.519 3 146 1.79e-45
XP_008813766.1 orthology 0.247 4 220 3.91e-75
XP_010920018.1 orthology 0.26 5 213 4.63e-72
bradi_pan_p002062 orthology 0.589 3 157 4.61e-50
cocnu_pan_p020915 orthology 0.268 5 - -
orysa_pan_p003551 orthology 0.449 3 174 6.76e-57
sorbi_pan_p007128 orthology 0.518 3 164 6.6e-53
tritu_pan_p029517 orthology 0.503 4 169 5.44e-55