Gene musac_pan_p001677
| Sequence ID | musac_pan_p001677 add to my list | ||
|---|---|---|---|
| Species | Musa acuminata | ||
| Alias | No gene alias | ||
| Pangenome status | Dispensable (2/4) | ||
| Length | 224aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 224 amino acids
>musac_pan_p001677_MUSAC MAPLLFREIKAAGFSCASPSSAAVCSTIHQRSIVQPVTGRAIDRHTPHLRDPQRTRSQFT SKPRSHNPKAGRKSSAKQADLVNPADSSRCLLSSSRFRLDDAAFYDIFPGPQPIPPPSPF PIETLRSQQCVRSCSERAVRRPSSSTRTQDQVVVLRVSLHCKGCEGKVRRHIAKMQGVSS FSVDLATKKVTVVGDVTPLGVLNSISKVKHAQFWQSPPRASASF
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP015837 | Unannotated cluster |
| 3 | GP040905 | Unannotated cluster |
| 4 | GP070656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p001677
Represented sequence(s):
Unrepresented genome(s):
MUSAC_Macbu1
MUSAC_Macma2
MUSAC_Macba2
MUSAC_Macze1
| 1. | 2. | 3. | |
|---|---|---|---|
| 1. Mabur_Contig15495_t000010 | 0.00 | -0.00 | -0.00 |
| 2. Mabur_Contig22030_t000010 | -0.00 | 0.00 | -0.00 |
| 3. Ma07_t15220.1 | -0.00 | -0.00 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Mba07_g13860.1 | orthology | 0.0112 | 1 | 434 | 2.62e-157 |
| XP_008795530.1 | orthology | 0.395 | 3 | 263 | 1.94e-89 |
| XP_010920737.1 | orthology | 0.412 | 4 | 263 | 2.2e-89 |
| cocnu_pan_p001522 | orthology | 0.392 | 4 | 250 | 6.23e-84 |