Gene musac_pan_p007187


Sequence ID musac_pan_p007187  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Dispensable (3/4)
Length 116aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 116 amino acids

>musac_pan_p007187_MUSAC
MLWICNLMAETVVLKVGMSCQGCVGAVKRVLTKMEGVESFDVDLKEQKVTVKGNVKPEDV
FQTVSKTGKKTSFWEAEPEAKEAAPATPTKEDAPSAPTEEDAPSAPDAAADVTTAA


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP239638 Unannotated cluster
3 GP341755 Unannotated cluster
4 GP463817 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p007187



Represented sequence(s):
MUSAC_Macbu1
Mabur_Contig496_t000040
MUSAC_Macze1
Mazeb_scaffold19648_t000010
MUSAC_Macma2
Ma06_t18740.1
Unrepresented genome(s):
MUSAC_Macba2
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU7Hr1G100230.1 orthology 0.653 3 124 2.47e-38
Mba06_g17710.1 orthology 0.0245 1 159 3.39e-52
Sspon.04G0025740-1B orthology 0.514 4 - -
Sspon.04G0025740-2C orthology 0.514 4 - -
Sspon.04G0025740-3D orthology 0.514 4 - -
bradi_pan_p000852 orthology 0.547 2 126 5.8e-39
maize_pan_p017319 orthology 0.482 2 124 5.86e-38
orysa_pan_p027340 orthology 0.423 2 128 1.93e-39
sorbi_pan_p000050 orthology 0.508 3 - -
tritu_pan_p009809 orthology 0.699 2 124 5.31e-38
tritu_pan_p034911 orthology 0.63 3 - -
tritu_pan_p050141 orthology 0.649 2 - -