Gene musac_pan_p010117
Sequence ID | musac_pan_p010117 add to my list | ||
---|---|---|---|
Species | Musa acuminata | ||
Alias | No gene alias | ||
Pangenome status | Core (4/4) | ||
Length | 253aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 253 amino acids
>musac_pan_p010117_MUSAC MGEEQKEEENKEEAAEEEPPEIVLKVDMHCEGCARKVERSLRRFEGVEDVKTDCKSRTVV IKGKAADPAKICERIQKKTGKKVELISPLPKPPEEEEKKEEAEAPPEETKEEPKPITVIL KVRMHCERCAQVLQKRIKKMDGVESVATDLASSQVIVTGFIDPVTLAENVHRRTRKQASI VPEEEKKEEEGEKKDENGDEEKMREEEEEKKEEEGMKDDISKYEYWPSSRDYVEYAYTPQ TFSDENPNACSVM
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
3 | GP040674 | Unannotated cluster |
4 | GP070448 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p010117
Represented sequence(s):
MUSAC_Macze1
MUSAC_Macba2
MUSAC_Macma2
MUSAC_Macbu1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Dr07989 | orthology | 0.506 | 3 | 222 | 3.91e-72 |
Mba01_g01930.1 | orthology | 0.0392 | 1 | 285 | 3.37e-98 |
ORGLA10G0044600.1 | orthology | 0.596 | 4 | 200 | 5.21e-64 |
XP_008785647.1 | orthology | 0.298 | 4 | 259 | 4.9e-87 |
XP_008790335.1 | orthology | 0.307 | 4 | - | - |
XP_010939247.1 | orthology | 0.305 | 5 | 261 | 1.28e-87 |
cocnu_pan_p027064 | orthology | 0.278 | 5 | 216 | 1.26e-71 |
cocnu_pan_p028794 | orthology | 0.33 | 4 | - | - |
orysa_pan_p012537 | orthology | 0.596 | 4 | 200 | 7.75e-64 |