Gene musac_pan_p011710


Sequence ID musac_pan_p011710  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 352aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 352 amino acids

>musac_pan_p011710_MUSAC
MGPFEKTSLITWVSYGVQVGRVLQLFCDPHTRRAAAPVICIPSSSISHPSTVQAGGRAAA
MAKKKNKGGENGEAAAGNPAGGAGRGGEGGNEEKDAGGSITVVLKVDMHCEGCAKKVIKS
VKGVQGVEGVKADAGSGKLTVMGKLDPWKLRDRVEAKTHKKVDLVSPANFPKKGADANDP
SSSSAKKPAAVKKPDDKKPQDKLAVTTVVLKIRLHCEGCIRRIRKTITKIKGVDSVVFDT
QKDLVTVKGTMDAKPLPEVLKAKLRRDVEVVQPKKDGGEKKDKGGGGEKKEKGGGGGGGG
GGGGQKETNAKAATVPEPPNEMDYYAGYGYRIELVHAPQLFSDENPNSCSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP040674 Unannotated cluster
4 GP071484 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p011710



Represented sequence(s):
MUSAC_Macma2
Ma01_t18200.1
MUSAC_Macba2
Maban_Contig559_t000270
MUSAC_Macze1
Mazeb_scaffold24180_t000010
MUSAC_Macbu1
Mabur_Contig4509_t000030
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba01_g27610.1 orthology 0.316 1 - -
XP_008789540.1 orthology 0.577 2 - -
XP_010935709.1 orthology 0.634 3 - -
XP_010940635.1 orthology 0.962 2 - -
XP_010940636.1 orthology 0.962 2 - -
XP_010940637.1 orthology 0.852 2 - -
XP_010940638.1 orthology 0.916 2 - -
XP_010940639.1 orthology 0.738 3 - -
XP_010940640.1 orthology 0.738 3 - -
XP_017698238.1 orthology 0.577 2 241 1.93e-78
XP_019710924.1 orthology 0.972 2 - -
XP_026663426.1 orthology 0.541 2 - -
cocnu_pan_p000446 orthology 0.735 3 - -
cocnu_pan_p014481 orthology 0.659 3 - -
cocnu_pan_p016505 orthology 1 2 - -