Gene musac_pan_p013615
Sequence ID | musac_pan_p013615 add to my list | ||
---|---|---|---|
Species | Musa acuminata | ||
Alias | No gene alias | ||
Pangenome status | Dispensable (3/4) | ||
Length | 146aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 146 amino acids
>musac_pan_p013615_MUSAC MPMVEMWVHIDCPGCENKIRKALSKLQGVDAVEIDMAMQKVTVIGWADQKKVLEAVRKTR CTAVLCPYPLNAETNVQAQEYYHLQHPTPAHRLLFNVAPRSYNYHKHGYDDSSLHGYYQE PAQTHIIGDDARARFSDDNPTACSVM
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
3 | GP040065 | Unannotated cluster |
4 | GP078604 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p013615
Represented sequence(s):
Unrepresented genome(s):
MUSAC_Macma2
MUSAC_Macba2
MUSAC_Macbu1
MUSAC_Macze1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
Mba06_g14980.1 | orthology | 0.239 | 1 | - | - |
XP_008812071.1 | orthology | 0.498 | 3 | - | - |
XP_010915521.1 | orthology | 0.513 | 4 | - | - |
XP_010925640.1 | orthology | 0.516 | 3 | - | - |
cocnu_pan_p022210 | orthology | 0.529 | 3 | - | - |
cocnu_pan_p023665 | orthology | 0.5 | 4 | - | - |