Gene musac_pan_p017535


Sequence ID musac_pan_p017535  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 375aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 375 amino acids

>musac_pan_p017535_MUSAC
MSKEDDSKFLKLQTCVVKVNICCDGCQKKVKKVLHKIDGVYTTTIDVENRKVTVTGNVDP
AILIRKLSKAGKHAELWSVKGGNPQNVANQLQKLQLQHVKQQQTQKGGGVSSKVGGGGGG
GEGGGGGKHQKGQQPQLQQFPQQAKGYKDLKFPNLKNLKFPFKKNTKEVKFNLHPEDERD
DGSDSDDEDDEFDEDLDDMDGIHETVRRDPKMTKLMNFQSNVKGLAKDKKGPATAGSKGG
GGGQLHNKAVGGNNGGGGKRGGGSGGGHANHSNPFHGGNRNDGVGGGLPMSNMQTPMGLT
GTFPGYFQGGTMLPPEMMAGANPYQQLHQRMMMNGPDRPALGYGYGRPAYMAPPHPHGEP
YTMFSDENPNGCSIV


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p017535



Represented sequence(s):
MUSAC_Macba2
Maban_Contig90_t002470
MUSAC_Macze1
Mazeb_scaffold494_t000040
MUSAC_Macbu1
Mabur_Contig3573_t000040
MUSAC_Macma2
Ma11_t18440.1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba11_g17720.1 orthology 0.0359 1 551 1.39e-198
XP_008793679.1 orthology 0.539 3 - -
XP_010907378.1 orthology 0.623 3 - -
XP_010931956.1 orthology 0.537 4 - -
cocnu_pan_p005203 orthology 0.529 4 - -
cocnu_pan_p028798 orthology 0.619 3 - -
cocnu_pan_p029011 orthology 0.629 3 - -