Gene musac_pan_p022014


Sequence ID musac_pan_p022014  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 185aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 185 amino acids

>musac_pan_p022014_MUSAC
MATALGRAMDSLVSIIYYPFGYQRNHRKSYSNSYYYTKEKSNGRKMSKGRPLSLQTVELK
VRMCCTGCERVVKHALLKLRGVDSVEVDLELEKVTVTGYVERNKVLKEVRRSGKKAEFWP
NPDLPLYFTTEKNYFHDEESFRGSYNYWRHGYNGDRHGRVPVPQRGEDAVSNMFNDDDVN
ACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p022014



Represented sequence(s):
MUSAC_Macma2
Ma11_t19790.1
MUSAC_Macba2
Maban_Contig90_t003950
MUSAC_Macze1
Mazeb_scaffold733_t000100
MUSAC_Macbu1
Mabur_Contig21070_t000020
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba11_g19060.1 orthology 0.0149 1 377 4.88e-136
XP_008783756.1 orthology 0.535 3 - -
XP_008808277.1 orthology 0.292 3 - -
XP_010919019.1 orthology 0.312 4 279 5.98e-97
XP_019709212.1 orthology 0.361 4 - -
cocnu_pan_p010737 orthology 0.308 4 248 5.65e-85
cocnu_pan_p018453 orthology 0.381 4 - -