Gene musac_pan_p028148
| Sequence ID | musac_pan_p028148 add to my list | ||
|---|---|---|---|
| Species | Musa acuminata | ||
| Alias | No gene alias | ||
| Pangenome status | Core (4/4) | ||
| Length | 339aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 339 amino acids
>musac_pan_p028148_MUSAC MGEAQQEEAKADPKPEVDHKKEDKKEKQEGIKKEEVDEKKAAEAKPSPPSPIVLSLDLHC VGCARKIEKLILKCRGVEGVEMDMVQNQVTVKGVVDPQVVCSRIQKRTLRRAKVLAPLPP AEGDYKPDAVPPQVSEMTTVELLVNMHCEACAQQLRRKILKMRGVQTVETDFGAGKITVT GTMKAETLVEHIHRRTLKFASIVSQPPKEEEKKQEDQKKAEEKPAEEKKEESREKKEEQK ATSEEEKTEGNKEGGDIGGGKEEKGGGEEANKEEDGGSKSIISEEDMMKRMMMYWNGGII GGEDMAKRTVHWVPVYVIQQPLPPPQIFSDENPNACCIL
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP126431 | Unannotated cluster |
| 4 | GP077890 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for musac_pan_p028148
Represented sequence(s):
MUSAC_Macze1
MUSAC_Macba2
MUSAC_Macbu1
MUSAC_Macma2
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Mba05_g22300.1 | orthology | 0.02 | 1 | 421 | 2.19e-148 |
| XP_008783550.1 | orthology | 0.358 | 3 | - | - |
| XP_008808288.1 | orthology | 0.394 | 2 | - | - |
| XP_008808289.1 | orthology | 0.394 | 2 | - | - |
| XP_010911103.1 | orthology | 0.541 | 3 | - | - |
| XP_010919013.1 | orthology | 0.425 | 3 | - | - |
| XP_010934034.1 | orthology | 0.38 | 4 | - | - |
| cocnu_pan_p018242 | orthology | 0.448 | 3 | - | - |
| cocnu_pan_p019921 | orthology | 0.386 | 4 | - | - |