Gene musac_pan_p029076


Sequence ID musac_pan_p029076  add to my list
Species Musa acuminata
Alias No gene alias
Pangenome status Core (4/4)
Length 352aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 352 amino acids

>musac_pan_p029076_MUSAC
MIRVINSYKPTISCPLLLAPTYHGGQLYDRSQDHHLHSSNAHSRAPLLPFPSLLSLIPFF
GTPLLLMAEAKECSETLKYQTLILKVSIHCEGCKKKVKKVLQSMEGVYKTTVDPQQHKVV
VTGNVAAEILIKKLLKAGKHAELWPETKPMETGGGGGSNAGSNNKKSKNNKPMEPSKNID
NSQVSNGKDDSTQVSDKPESEASKNGSKEPPPPPEKEDEGNKSAATEGGGKKKGKKGQKE
NSNSNNDNKSGSASGGGGGSATEVEVAPQEASKKAGASGGVAIPPTFNFPVYTTSQLPSY
LVSYNSMQPSMSHGGAYYTALPMLQSSYIYSTASPCSCYTCSDENSSACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for musac_pan_p029076



Represented sequence(s):
MUSAC_Macma2
Ma02_t04230.1
MUSAC_Macba2
Maban_Contig212_t000460
MUSAC_Macbu1
Mabur_Contig43973_t000030
MUSAC_Macze1
Mazeb_scaffold399_t000040
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba02_g04300.1 orthology 0.0243 1 372 1.05e-129
XP_008800848.2 orthology 0.606 2 - -
XP_008805754.1 orthology 0.562 3 - -
XP_010914416.1 orthology 0.587 4 - -
XP_010931631.1 orthology 0.602 3 - -
cocnu_pan_p006778 orthology 0.623 3 206 1.52e-63
cocnu_pan_p023410 orthology 0.527 4 - -