GreenPhyl v5 - Gene musac_pan

Gene musac_pan_p034720

Sequence ID

musac_pan_p034720 ^{add to my list}

Species

Musa acuminata

Alias

No gene alias

Pangenome status

Specific (1/4)

Length

155aa

Gene Ontology

biological_process	metal ion transport GO:0030001 - metal ion transport

Gene Sequence
Gene Classification
Domain Pattern
Pangene Composition
Homolog Predictions

155 amino acids

>musac_pan_p034720_MUSAC
MGLLEHVSELCSVSRSRKKLKKNKQLQTVELKVRMDCEGCERRVRKAVEGMKGVSSVEIE
PKHKKVTVIGFVDPKKVIKRVEWKTGKKAEPWPYVPYDVVPHPYAPGAYDKKAPPGYVRN
VLDDPDAAPLARASSTEVKYTTAFSDDNPNSCTIM

Clustering Level	Family ID	Family Name
1	Heavy metal transport/detoxification protein superfamily GP000323	Heavy metal transport/detoxification protein superfamily
2	Heavy metal transport/detoxification group1 GP015397	Heavy metal transport/detoxification group1
3	GP040065	Unannotated cluster
4	GP463617	Unannotated cluster

This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.

ID	Name	Type
Heavy metal-associated domain, HMA IPR006121	Heavy metal-associated domain, HMA	Domain
Heavy metal-associated domain superfamily IPR036163	Heavy metal-associated domain superfamily	Homologous_superfamily

IPR006121 IPR036163

IPR domains for musac_pan_p034720

Represented sequence(s):

MUSAC_Macbu1

Mabur_Contig17478_t000050

Unrepresented genome(s):

MUSAC_Macba2

MUSAC_Macma2

MUSAC_Macze1

	Homology			RBH
Similar Sequence ID	Type	Evolutionary distance	Node distance	score	e-value
HORVU2Hr1G011060.1	orthology	0.468	5	-	-
HORVU6Hr1G009000.1	orthology	0.479	3	222	9.63e-75
HORVU7Hr1G090970.1	orthology	0.599	3	-	-
Mba04_g22800.1	orthology	0.0422	1	298	1.3e-105
ORGLA04G0039000.1	orthology	0.464	4	-	-
Sspon.05G0013620-1A	orthology	0.427	3	-	-
Sspon.05G0013620-2B	orthology	0.414	3	-	-
Sspon.05G0013620-3C	orthology	0.414	3	-	-
Sspon.05G0013620-4D	orthology	0.42	2	-	-
bradi_pan_p006044	orthology	0.494	4	-	-
bradi_pan_p040029	orthology	0.442	2	-	-
maize_pan_p004232	orthology	0.395	2	-	-
orysa_pan_p007886	orthology	0.464	4	-	-
sorbi_pan_p013767	orthology	0.44	3	-	-
tritu_pan_p002673	orthology	0.496	5	-	-
tritu_pan_p014563	orthology	0.455	3	-	-
tritu_pan_p034454	orthology	0.607	3	-	-