Gene orysa_pan_p007886
Sequence ID | orysa_pan_p007886 add to my list | ||
---|---|---|---|
Species | Oryza sativa | ||
Alias | No gene alias | ||
Pangenome status | Dispensable (6/7) | ||
Length | 155aa | ||
Gene Ontology |
Display term(s) (1)
|
Length: 155 amino acids
>orysa_pan_p007886_ORYSA MGIVDVVSEFCSVPRTRRHLKKRKQFQTVEMKVRIDCEGCERKIKKALEDMKGVSSVEVT AKQNKVTVTGYVDAGKVMRRVAYKTGKRVEPWPYVPYDTVAHPYAPGAYDKKAPAGYVRN VVSDPSAAPLARASSTEVRYTAAFSDENPNACSVM
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
3 | GP040065 | Unannotated cluster |
4 | GP463617 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for orysa_pan_p007886
Represented sequence(s):
Unrepresented genome(s):
ORYSA_N22_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_R498_IGDB_v3.0
ORYSA_ZS97_v1.0
ORYSA_Kitaake_v3.1
ORYSA_MH63_v1.0
ORYSA_IR8_v1.0
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
HORVU2Hr1G011060.1 | orthology | 0.0773 | 4 | - | - |
Mba04_g22800.1 | orthology | 0.422 | 4 | 238 | 5.52e-82 |
Mba04_g33020.1 | orthology | 0.463 | 4 | - | - |
ORGLA04G0039000.1 | orthology | 0 | 1 | 308 | 1.3e-109 |
bradi_pan_p006044 | orthology | 0.103 | 3 | 289 | 6.99e-102 |
musac_pan_p005239 | orthology | 0.463 | 4 | 238 | 8.65e-82 |
musac_pan_p034720 | orthology | 0.464 | 4 | - | - |
tritu_pan_p002673 | orthology | 0.106 | 4 | 288 | 9.8e-102 |