Gene orysa_pan_p009798
| Sequence ID | orysa_pan_p009798 add to my list | ||
|---|---|---|---|
| Species | Oryza sativa | ||
| Alias | No gene alias | ||
| Pangenome status | Core (7/7) | ||
| Length | 534aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 534 amino acids
>orysa_pan_p009798_ORYSA MSKEEVLKIQTCVLKVNIHCDGCQKKVKKILHKIEGVYQTSIDAEQGKVTVSGLVDPATI IKKLNKAGKPAELWGSKVGVAAVNNQFQKLHLDGGGGGKGQPKDGGGKGHPKDAGGKGQK GGGGGGGNGGGGSKDVKMMMPPQMPQPTPQQLQQLQQQLQMKGLKLPQFMDAAKMAPFAA AAPIKDPKSVKFNLPPEDDFGDDGSEFDDEFDEFDDEDDFDDDGLDEDYFDDPKMMKQMA MPPPNAGGGGDKKGGGKKGGGGNEIPVQIKGNANNAAGGGGKKDAGGKQNQGGGGGNGKN GGGGGQPNNAKGGGAPNGGGNHPAQGKKGGGGGGGGQGGGVGGPMGGMPAQQQAMMMRPN MMGGGAGFPGMGQIGGGPMTMPMAHHPHMGSAQGGGAGAVQGMPPAAFYQGGGGGGGGGM PSGPEMLQAAAAAGNPMVQQQYMAMMQQQQQQMMMNGHGHHGHGHHHGHHGHGGGAAPAG YPAMGYGYGRPPMPYPMHYPMQPHPHADPYNYFSDENPNSCSVMRIVVGVCQGL
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP467501 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for orysa_pan_p009798
Represented sequence(s):
ORYSA_N22_v1.0
ORYSA_R498_IGDB_v3.0
ORYSA_ZS97_v1.0
ORYSA_IR8_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_Kitaake_v3.1
ORYSA_MH63_v1.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| ORGLA12G0025900.1 | orthology | 0.0133 | 1 | 505 | 2.06e-171 |