Gene orysa_pan_p015305


Sequence ID orysa_pan_p015305  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Core (7/7)
Length 211aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 211 amino acids

>orysa_pan_p015305_ORYSA
MDEENASSTNSIKLELRIYMHCKACERSVRRAIEKIDGVEKVEVERGENKVTVTGGGDFE
PEKAVRRIKKKTGKKVEILALEEEDDDHEEDGGGGADAQAHHEFQRHGYYVPYYHHRHHH
HLVPVPCAYVPSCYDHLVPVPPPDNGGGGTADVAHEFQRRGGVGHYGYYAPCYYDGGGGG
GDVAHEIQRPVRSAWDLHGFDDENTQACRVT



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397
Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP489214 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for orysa_pan_p015305



Represented sequence(s):
ORYSA_N22_v1.0
ORYSA_MH63_v1.0
ORYSA_Kitaake_v3.1
ORYSA_R498_IGDB_v3.0
ORYSA_Nipponbare_v7.0
ORYSA_IR8_v1.0
ORYSA_ZS97_v1.0



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
ORGLA04G0148800.1 orthology 0.001 1 298 2.14e-103