Gene orysa_pan_p019824


Sequence ID orysa_pan_p019824  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Core (7/7)
Length 185aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 185 amino acids

>orysa_pan_p019824_ORYSA
MADIVSDVFLSFFCCCYYPPGGHRGVGAHNDTALRRRRGGAGRSSSRPPVSLQTVELKVR
MCCEGCERVVRSALANLRGVDSVEVDVAMEKVRVTGYVDRGRVLREVRRSGKKAEFWPSG
GTPRRFTSEKEYFRDGEAYRGSYNYHRRGYGDGDRHGWMREPARGADAVSNMFNDDDVSA
ACAIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP078604 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for orysa_pan_p019824



Represented sequence(s):
ORYSA_IR8_v1.0
OsIR8_10T0177100
ORYSA_MH63_v1.0
OsMH_10T0345800
ORYSA_N22_v1.0
A2J10_10T0164000
ORYSA_R498_IGDB_v3.0
OsR498G1019105300.01.T01
ORYSA_Nipponbare_v7.0
LOC_Os10g39210.1
ORYSA_Kitaake_v3.1
OsKitaake10g174200.1
ORYSA_ZS97_v1.0
OsZS_10T0369400
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
ORGLA10G0119900.1 orthology 0.0055 1 302 2.4e-106
tritu_pan_p003148 orthology 0.291 2 201 3.08e-66