Gene orysa_pan_p027340


Sequence ID orysa_pan_p027340  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Core (7/7)
Length 132aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 132 amino acids

>orysa_pan_p027340_ORYSA
MAAETVVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSK
TGKKTSFWEAAEAASDSAAAAAPAPAPATAEAEAEAEAAPPTTTAAEAPAIAAAAAPPAP
AAPEAAPAKADA


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP239638 Unannotated cluster
3 GP341755 Unannotated cluster
4 GP463817 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for orysa_pan_p027340



Represented sequence(s):
ORYSA_Kitaake_v3.1
OsKitaake02g193950.1
ORYSA_IR8_v1.0
OsIR8_02T0189400
ORYSA_Nipponbare_v7.0
LOC_Os02g32814.1
ORYSA_R498_IGDB_v3.0
OsR498G0203987400.01.T02
ORYSA_MH63_v1.0
OsMH_02T0323700
ORYSA_N22_v1.0
A2J10_02T0201400
ORYSA_ZS97_v1.0
OsZS_02T0343400
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
Mba06_g17710.1 orthology 0.447 2 131 5.8e-41
musac_pan_p007187 orthology 0.423 2 131 1.04e-40