Gene orysa_pan_p037625
| Sequence ID | orysa_pan_p037625 add to my list | ||
|---|---|---|---|
| Species | Oryza sativa | ||
| Alias | No gene alias | ||
| Pangenome status | Core (7/7) | ||
| Length | 860aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 860 amino acids
>orysa_pan_p037625_ORYSA MGNDGEKASKLCKEAGGPSLDSNLAPTIVLALTTVPMGWDNRRRKQASTIMNARGRGARN GNGPNRGRGGGRAHSDVVVGANTTVLATRRWVGLEIDSVPGNEGQRDIVNYYLRCATGIG NGERELAVVGTHHSNRRVTYVVHEPFLQSLKELQVAAVVGVERLMWKSRKDVVHWLNMLI SDVASDEVAICNNDGKDAKLANISTTKGSSSSTAGNDSGDFKWLGPESHSKKGKSYKSFW RRGFTFMVHDFVYILVQHGNKLVAYVEELYEDNHANKMVQIRRFHTLNSTGIQLSPGVND REILHSDNLQDIGVECIDGLASVLNEEHFEMFQAIANNTNRQPYLCIRHIDNNSNVKTFD IAQLQGYSEQEIFRIVSGTPPVTVHPDASEGSKNTPRSSARGHHHHRTMENPTASDETNV QATTINVLARNAAPTESASALINSALEKYLEQYFSHGCLVECLSQDSGIRGCWFIGSVIR RRGDRIKVRYQHLQDPETPRANLEEWLLVTRTANPDTLRIRLSGRTRIRPHNMSERENPS TISVGTVIDGWLYDGWWEGIVLKVNDARRLLAYLPGEKKMVLFRKDQLRHSLEWIDNEWK NFAHREDIARRIPSAEDLRIRVITAREVPTREEVMKQLEGLKTNKGGSNSAKPAAEKGSS SSATKKTTPDLIRHATNDLGSSNFKHVSVPASEEIRTDNKGSQVNLENVLKSDSLKWTEH KARGSFGPRIADSSAPEKKRLPLLRGRPSVGGEDSWKRRRARPPMDYRLYYMTLRMNIDC NGCYHKIRRALLQMQELESHLIDRKHGRVSVFGAFSPQDVAIKIRKRTNRRVEILEVREA APPPPPAGDEGGGGGGGHAA
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP109350 | Unannotated cluster |
| 3 | GP119142 | Unannotated cluster |
| 4 | GP077996 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
|
Agenet-like domain
IPR008395
|
Agenet-like domain | Domain |
|
Agenet domain, plant type
IPR014002
|
Agenet domain, plant type | Domain |
|
Bromo adjacent homology (BAH) domain superfamily
IPR043151
|
Bromo adjacent homology (BAH) domain superfamily | Homologous_superfamily |
|
Bromo adjacent homology (BAH) domain
IPR001025
|
Bromo adjacent homology (BAH) domain | Domain |
Figure 1: IPR domains for orysa_pan_p037625
Represented sequence(s):
ORYSA_IR8_v1.0
ORYSA_Kitaake_v3.1
ORYSA_ZS97_v1.0
ORYSA_R498_IGDB_v3.0
ORYSA_N22_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_MH63_v1.0
| 1. | 2. | 3. | 4. | 5. | 6. | 7. | 8. | 9. | 10. | 11. | 12. | 13. | 14. | 15. | 16. | 17. | 18. | 19. | 20. | 21. | 22. | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. OsIR8_09T0110400 | 0.00 | 12.87 | 6.52 | 1.10 | -0.00 | 1.06 | 6.96 | 45.84 | 13.17 | 36.91 | 20.17 | 1.10 | 27.97 | 13.01 | 2.59 | 9.29 | 51.92 | 6.30 | 8.30 | -0.00 | 2.21 | 45.84 |
| 2. OsIR8_10T0100800 | 12.87 | 0.00 | 3.94 | 8.65 | 105.28 | 12.87 | 2.37 | 19.19 | 4.47 | 80.06 | 13.53 | 8.65 | 40.57 | 20.26 | 9.87 | 2.39 | 61.14 | 9.00 | 3.46 | 105.28 | 9.54 | 19.19 |
| 3. OsKitaake10g089800.1 | 6.52 | 3.94 | 0.00 | 6.23 | 999999 | 6.52 | 2.08 | 108.29 | 2.22 | 95.36 | 2.78 | 6.23 | 39.50 | 999999 | 10.19 | 3.61 | 52.94 | 10.98 | 3.37 | 999999 | 6.52 | 108.29 |
| 4. OsKitaake09g095200.1 | 1.10 | 8.65 | 6.23 | 0.00 | 999999 | 1.10 | 6.67 | 108.29 | 6.67 | 92.87 | 9.20 | -0.00 | 40.66 | 999999 | 3.18 | 9.29 | 51.92 | 8.28 | 7.58 | 999999 | 1.10 | 108.29 |
| 5. OsKitaake09g095300.1 | -0.00 | 105.28 | 999999 | 999999 | 0.00 | -0.00 | 999999 | 105.28 | 105.28 | -0.00 | 59.93 | 999999 | -0.00 | 220.91 | 999999 | -nan | 999999 | -nan | 999999 | -0.00 | -0.00 | 105.28 |
| 6. OsMH_09T0244200 | 1.06 | 12.87 | 6.52 | 1.10 | -0.00 | 0.00 | 6.96 | 45.84 | 13.17 | 36.91 | 20.17 | 1.10 | 27.97 | 13.01 | 2.59 | 9.29 | 51.92 | 6.30 | 8.30 | -0.00 | 0.91 | 45.84 |
| 7. OsMH_10T0234700 | 6.96 | 2.37 | 2.08 | 6.67 | 999999 | 6.96 | 0.00 | 113.23 | 0.41 | 100.56 | 4.92 | 6.67 | 41.25 | 999999 | 9.87 | 2.09 | 56.08 | 13.05 | -0.00 | 999999 | 6.96 | 113.23 |
| 8. OsMH_10T0234800 | 45.84 | 19.19 | 108.29 | 108.29 | 105.28 | 45.84 | 113.23 | 0.00 | 30.08 | 114.93 | 122.97 | 108.29 | 113.23 | 20.26 | 155.28 | 166.71 | 102.75 | 114.93 | 102.95 | 105.28 | 105.28 | -0.00 |
| 9. A2J10_10T0100900 | 13.17 | 4.47 | 2.22 | 6.67 | 105.28 | 13.17 | 0.41 | 30.08 | 0.00 | 100.98 | 19.15 | 6.67 | 43.14 | 20.26 | 9.87 | 2.09 | 56.08 | 13.05 | 1.33 | 105.28 | 7.57 | 30.08 |
| 10. A2J10_09T0106300 | 36.91 | 80.06 | 95.36 | 92.87 | -0.00 | 36.91 | 100.56 | 114.93 | 100.98 | 0.00 | 74.57 | 92.87 | -0.00 | 220.91 | 199.23 | 70.99 | 20.18 | 71.94 | 100.75 | -0.00 | 36.91 | 114.93 |
| 11. LOC_Os10g26430.1 | 20.17 | 13.53 | 2.78 | 9.20 | 59.93 | 20.17 | 4.92 | 122.97 | 19.15 | 74.57 | 0.00 | 9.20 | 38.51 | 145.63 | 10.50 | 3.61 | 57.90 | 11.44 | 9.76 | 59.93 | 10.08 | 122.97 |
| 12. LOC_Os09g24290.1 | 1.10 | 8.65 | 6.23 | -0.00 | 999999 | 1.10 | 6.67 | 108.29 | 6.67 | 92.87 | 9.20 | 0.00 | 40.66 | 999999 | 3.18 | 9.29 | 51.92 | 8.28 | 7.58 | 999999 | 1.10 | 108.29 |
| 13. LOC_Os09g24310.1 | 27.97 | 40.57 | 39.50 | 40.66 | -0.00 | 27.97 | 41.25 | 113.23 | 43.14 | -0.00 | 38.51 | 40.66 | 0.00 | 220.91 | 35.27 | 26.64 | 7.77 | 45.43 | 67.29 | -0.00 | 27.97 | 113.23 |
| 14. LOC_Os09g24300.1 | 13.01 | 20.26 | 999999 | 999999 | 220.91 | 13.01 | 999999 | 20.26 | 20.26 | 220.91 | 145.63 | 999999 | 220.91 | 0.00 | 999999 | -nan | 999999 | -nan | 999999 | 220.91 | 148.02 | 20.26 |
| 15. OsR498G0917425300.01.T01 | 2.59 | 9.87 | 10.19 | 3.18 | 999999 | 2.59 | 9.87 | 155.28 | 9.87 | 199.23 | 10.50 | 3.18 | 35.27 | 999999 | 0.00 | 7.17 | 148.02 | 199.23 | 999999 | -nan | 2.59 | 155.28 |
| 16. OsR498G1018671500.01.T01 | 9.29 | 2.39 | 3.61 | 9.29 | -nan | 9.29 | 2.09 | 166.71 | 2.09 | 70.99 | 3.61 | 9.29 | 26.64 | -nan | 7.17 | 0.00 | 241.20 | 41.05 | 41.05 | 999999 | 9.29 | 166.71 |
| 17. OsR498G0917426500.01.T01 | 51.92 | 61.14 | 52.94 | 51.92 | 999999 | 51.92 | 56.08 | 102.75 | 56.08 | 20.18 | 57.90 | 51.92 | 7.77 | 999999 | 148.02 | 241.20 | 0.00 | 101.26 | 110.48 | 999999 | 51.92 | 102.75 |
| 18. OsR498G0917425700.01.T02 | 6.30 | 9.00 | 10.98 | 8.28 | -nan | 6.30 | 13.05 | 114.93 | 13.05 | 71.94 | 11.44 | 8.28 | 45.43 | -nan | 199.23 | 41.05 | 101.26 | 0.00 | 7.58 | 999999 | 6.30 | 114.93 |
| 19. OsR498G1018671700.01.T01 | 8.30 | 3.46 | 3.37 | 7.58 | 999999 | 8.30 | -0.00 | 102.95 | 1.33 | 100.75 | 9.76 | 7.58 | 67.29 | 999999 | 999999 | 41.05 | 110.48 | 7.58 | 0.00 | 999999 | 8.30 | 102.95 |
| 20. OsR498G0917426900.01.T02 | -0.00 | 105.28 | 999999 | 999999 | -0.00 | -0.00 | 999999 | 105.28 | 105.28 | -0.00 | 59.93 | 999999 | -0.00 | 220.91 | -nan | 999999 | 999999 | 999999 | 999999 | 0.00 | -0.00 | 105.28 |
| 21. OsZS_09T0221700 | 2.21 | 9.54 | 6.52 | 1.10 | -0.00 | 0.91 | 6.96 | 105.28 | 7.57 | 36.91 | 10.08 | 1.10 | 27.97 | 148.02 | 2.59 | 9.29 | 51.92 | 6.30 | 8.30 | -0.00 | 0.00 | 105.28 |
| 22. OsZS_10T0254600 | 45.84 | 19.19 | 108.29 | 108.29 | 105.28 | 45.84 | 113.23 | -0.00 | 30.08 | 114.93 | 122.97 | 108.29 | 113.23 | 20.26 | 155.28 | 166.71 | 102.75 | 114.93 | 102.95 | 105.28 | 105.28 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| ORGLA09G0073900.1 | orthology | 0.21 | 1 | - | - |
| bradi_pan_p028263 | orthology | 0.468 | 2 | - | - |
| maize_pan_p009159 | orthology | 0.68 | 5 | - | - |
| musac_pan_p023320 | orthology | 1 | 5 | - | - |
| sorbi_pan_p029803 | orthology | 0.578 | 5 | - | - |
| tritu_pan_p004118 | orthology | 0.525 | 3 | - | - |
| tritu_pan_p024914 | orthology | 0.516 | 3 | - | - |
| tritu_pan_p040052 | orthology | 0.505 | 3 | - | - |
| tritu_pan_p048949 | orthology | 0.6 | 3 | - | - |