Gene orysa_pan_p041308


Sequence ID orysa_pan_p041308  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Dispensable (6/7)
Length 432aa



Length: 432 amino acids

>orysa_pan_p041308_ORYSA
MMERSLMEALATAAQGGTVGTSVFDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGR
KLLNGLVFSLLLPCLIFSQLGRAITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPP
YPYFKFTVIHIGIGNIGNIPLVLIAALCRDPTNPFGDSDKCNEDGNAYISFGQWVGAIIV
YTYVFKMLAPPPGESFDSAEEDILPIKASGDNVVPEKGKYPTSTRTSTVPENEPLLSSEG
DKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLF
FFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGII
VLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWVHIFAVFSM
AGWIILYLSLLF



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355
Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP132349 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776
Membrane transport protein Family

IPR004776
Figure 1: IPR domains for orysa_pan_p041308



Represented sequence(s):
ORYSA_MH63_v1.0
ORYSA_Kitaake_v3.1
ORYSA_Nipponbare_v7.0
ORYSA_IR8_v1.0
ORYSA_R498_IGDB_v3.0
ORYSA_N22_v1.0
Unrepresented genome(s):
ORYSA_ZS97_v1.0



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
ORGLA01G0289900.1 orthology 0 1 840 5.43e-311