Gene orysa_pan_p041308
| Sequence ID | orysa_pan_p041308 add to my list |
|---|---|
| Species | Oryza sativa |
| Alias | No gene alias |
| Pangenome status | Dispensable (6/7) |
| Length | 432aa |
Length: 432 amino acids
>orysa_pan_p041308_ORYSA MMERSLMEALATAAQGGTVGTSVFDMLKYAVLPIAKVFTVCFMGFLMASKYVNILQPNGR KLLNGLVFSLLLPCLIFSQLGRAITIEKMLQWWYIPVNIVVGAVSGSLIGFVVASIIRPP YPYFKFTVIHIGIGNIGNIPLVLIAALCRDPTNPFGDSDKCNEDGNAYISFGQWVGAIIV YTYVFKMLAPPPGESFDSAEEDILPIKASGDNVVPEKGKYPTSTRTSTVPENEPLLSSEG DKNVSTSLGSKIMGIVRSMVKFLKDKQLLQPPIIASVFAIAIGVVPVLKNFVLTDDAPLF FFTDSCLILGEAMIPCILLAVGGNLVDGPGEGSNRLGVRTTVAIIFARLILVPLAGVGII VLVDKLGFIPKDDKMFKFVLLLQHSMPTSVLSGAVANLRGCGKESAAILFWVHIFAVFSM AGWIILYLSLLF
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP132349 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for orysa_pan_p041308
Represented sequence(s):
Unrepresented genome(s):
ORYSA_R498_IGDB_v3.0
ORYSA_IR8_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_Kitaake_v3.1
ORYSA_MH63_v1.0
ORYSA_N22_v1.0
ORYSA_ZS97_v1.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| ORGLA01G0289900.1 | orthology | 0 | 1 | 840 | 5.43e-311 |