Gene orysa_pan_p049257


Sequence ID orysa_pan_p049257  add to my list
Species Oryza sativa
Alias No gene alias
Pangenome status Dispensable (6/7)
Length 136aa



Length: 136 amino acids

>orysa_pan_p049257_ORYSA
MLWAFKKSPRGPYRNRSLTRTREKPRSHRLLLSRNASPLLSSLLSPAAAAAESDPNQAKM
TAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGPP
VIMNPISRQNFIVKST



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Unknown function duf1138 family
GP002478
Unknown function duf1138 family
2 GP018276 Unannotated cluster
3 GP042981 Unannotated cluster
4 GP072479 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Protein of unknown function DUF1138
IPR009515
Protein of unknown function DUF1138 Family

IPR009515
Figure 1: IPR domains for orysa_pan_p049257



Represented sequence(s):
ORYSA_MH63_v1.0
ORYSA_ZS97_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_IR8_v1.0
ORYSA_Kitaake_v3.1
ORYSA_N22_v1.0
Unrepresented genome(s):
ORYSA_R498_IGDB_v3.0

  1. 2. 3. 4. 5. 6. 7. 8. 9.
1. OsIR8_06T0009600 0.00 8.66 0.74 0.74 0.68 8.66 1.31 8.66 -0.00
2. OsKitaake06g009150.1 8.66 0.00 129.09 129.09 7.97 -0.00 140.42 -0.00 129.09
3. OsKitaake06g009200.1 0.74 129.09 0.00 -0.00 -0.00 129.09 -0.00 129.09 0.74
4. OsMH_06T0012300 0.74 129.09 -0.00 0.00 -0.00 129.09 -0.00 129.09 0.74
5. A2J10_06T0009700 0.68 7.97 -0.00 -0.00 0.00 7.97 -0.00 7.97 0.74
6. LOC_Os06g02460.1 8.66 -0.00 129.09 129.09 7.97 0.00 140.42 -0.00 129.09
7. LOC_Os06g02470.1 1.31 140.42 -0.00 -0.00 -0.00 140.42 0.00 140.42 1.31
8. OsZS_06T0013300 8.66 -0.00 129.09 129.09 7.97 -0.00 140.42 0.00 129.09
9. OsZS_06T0013400 -0.00 129.09 0.74 0.74 0.74 129.09 1.31 129.09 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
ORGLA06G0009300.1 orthology 0.0152 1 161 4.2e-53