Gene orysa_pan_p049257
| Sequence ID | orysa_pan_p049257 add to my list |
|---|---|
| Species | Oryza sativa |
| Alias | No gene alias |
| Pangenome status | Dispensable (6/7) |
| Length | 136aa |
Length: 136 amino acids
>orysa_pan_p049257_ORYSA MLWAFKKSPRGPYRNRSLTRTREKPRSHRLLLSRNASPLLSSLLSPAAAAAESDPNQAKM TAGYIAGSLVGSFAIAYLCDTFVSDKKAFGGSIPKTVSDKEWWQATDTKFQAWPRTAGPP VIMNPISRQNFIVKST
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Unknown function duf1138 family
GP002478 |
Unknown function duf1138 family |
| 2 | GP018276 | Unannotated cluster |
| 3 | GP042981 | Unannotated cluster |
| 4 | GP072479 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Protein of unknown function DUF1138
IPR009515
|
Protein of unknown function DUF1138 | Family |
Figure 1: IPR domains for orysa_pan_p049257
Represented sequence(s):
Unrepresented genome(s):
ORYSA_N22_v1.0
ORYSA_Nipponbare_v7.0
ORYSA_MH63_v1.0
ORYSA_ZS97_v1.0
ORYSA_Kitaake_v3.1
ORYSA_IR8_v1.0
ORYSA_R498_IGDB_v3.0
| 1. | 2. | 3. | 4. | 5. | 6. | 7. | 8. | 9. | |
|---|---|---|---|---|---|---|---|---|---|
| 1. OsIR8_06T0009600 | 0.00 | 8.66 | 0.74 | 0.74 | 0.68 | 8.66 | 1.31 | 8.66 | -0.00 |
| 2. OsKitaake06g009150.1 | 8.66 | 0.00 | 129.09 | 129.09 | 7.97 | -0.00 | 140.42 | -0.00 | 129.09 |
| 3. OsKitaake06g009200.1 | 0.74 | 129.09 | 0.00 | -0.00 | -0.00 | 129.09 | -0.00 | 129.09 | 0.74 |
| 4. OsMH_06T0012300 | 0.74 | 129.09 | -0.00 | 0.00 | -0.00 | 129.09 | -0.00 | 129.09 | 0.74 |
| 5. A2J10_06T0009700 | 0.68 | 7.97 | -0.00 | -0.00 | 0.00 | 7.97 | -0.00 | 7.97 | 0.74 |
| 6. LOC_Os06g02460.1 | 8.66 | -0.00 | 129.09 | 129.09 | 7.97 | 0.00 | 140.42 | -0.00 | 129.09 |
| 7. LOC_Os06g02470.1 | 1.31 | 140.42 | -0.00 | -0.00 | -0.00 | 140.42 | 0.00 | 140.42 | 1.31 |
| 8. OsZS_06T0013300 | 8.66 | -0.00 | 129.09 | 129.09 | 7.97 | -0.00 | 140.42 | 0.00 | 129.09 |
| 9. OsZS_06T0013400 | -0.00 | 129.09 | 0.74 | 0.74 | 0.74 | 129.09 | 1.31 | 129.09 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| ORGLA06G0009300.1 | orthology | 0.0152 | 1 | 161 | 4.2e-53 |