Gene sorbi_pan_p021880
| Sequence ID | sorbi_pan_p021880 add to my list |
|---|---|
| Species | Sorghum bicolor |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 507aa |
Length: 507 amino acids
>sorbi_pan_p021880_SORBI MDSLVKCGNGYGGYGYGYGYGYGNSKPQMNYNRQNTESVTTVVTEINRMTVNDKPSCYGG GGDVQKQACKVEAFEEHDEAYNGAVAVQKHSFKEEKEERYGAAAVKKHDEYKEEKYGEVI DAEYGAHYGGGAAALKKQQGYGYKQEAYGETEGAAGYGGAHYGAGGMKQGYNYKQEAYGD TEAAAGYGGAHYGAGGGVKKQGGYSYTQEACGESNAGYGAHHGGAGAAVQTYAYDQQAAY GGAVGAAVQQQAYKHKDAASKMNGSQQKMYGYGEAAVDAAGAGYGAHCGGGGVQQQHGYQ KDAYGYGAAAGGKVKKNGYQYQEAYGRSDAGGYGAHYGGAGGGAVQQYGYQQKDAYGGAT AGGKVKKTGYQYQEAYGGTGAGAGGYGAHYGGGAAAVQKHHGYMQDVYESETESESDESD CDEAFPPRGGVQHSYGAYKQEKHHGAGNLGGVRRYESYETREELGGGRRYESYQSSVQYT GGSGGGGGSGYATCSPIKNRHLLRYGA
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | GP009446 | Unannotated cluster |
| 2 | GP031904 | Unannotated cluster |
| 3 | GP059851 | Unannotated cluster |
| 4 | GP092704 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
No IPR domain.
Represented sequence(s):
SORBI_BTx623_v3.1.1
SORBI_Tx430_v1.0
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Sspon.03G0000620-1A | orthology | 0.0778 | 1 | 385 | 1.72e-129 |
| Sspon.03G0000620-2B | orthology | 0.0899 | 1 | - | - |
| Sspon.03G0000620-3C | orthology | 0.0835 | 1 | - | - |
| maize_pan_p012203 | orthology | 0.246 | 2 | 354 | 3e-118 |