Gene sorbi_pan_p024494
| Sequence ID | sorbi_pan_p024494 add to my list | ||
|---|---|---|---|
| Species | Sorghum bicolor | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 396aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 396 amino acids
>sorbi_pan_p024494_SORBI MGEEAKKEDAKKEVEKPKEAAAAEEKKEEKPKDDGAAAAEDKPKEAGGGGGEEKPKDGEE KKEDAPPPPPPPPEEVEMRVYMHCEGCARKVKKILKRFDGVEDVIADSKAHKVLVKGKKV AAEPMKVVERVQKKTGRKVELLSPIPPPPEEKKEEEKKEEPEPPKPEEKKEPPVLAVVLK VHMHCEACAQGIRKRILKMKGVQSVEADLKASEVTVKGVFEESKLAEYVYKRTGKHAAIV KSETVPPPESAPAAGDDKAKEEKKEEGGGEEKKDGKEEEKKEGGGDGGGGDEKKEEKEGG GGGGGDEKKEDADKDKDAAAVAAANLYMHYPRFAFPGGYYQPAYPPPPPPPPGYAYQAYQ PAYPPSSYAYAAAPPHHQPMAPQIFSDENPNACSVM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015545 |
Heavy metal transport/detoxification group1 |
| 3 | GP040674 | Unannotated cluster |
| 4 | GP465991 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for sorbi_pan_p024494
Represented sequence(s):
SORBI_Tx430_v1.0
SORBI_BTx623_v3.1.1
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Sspon.05G0012780-1A | orthology | 0.0619 | 1 | - | - |
| Sspon.05G0012780-2B | orthology | 0.0626 | 1 | - | - |
| Sspon.05G0012780-3C | orthology | 0.06 | 1 | 346 | 1.85e-116 |
| Sspon.05G0012780-4D | orthology | 0.0643 | 1 | - | - |