Gene soybn_pan_p008062


Sequence ID soybn_pan_p008062  add to my list
Species Glycine max
Alias No gene alias
Pangenome status Core (2/2)
Length 240aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 240 amino acids

>soybn_pan_p008062_SOYBN
MKGIDLFCSSSASTAVNSSMHHRSMVHRSTKSFDHDRRKSQLHVPCSSQLPINPKPYNYF
EKHRKSSASADKQNCDVRRKSSADVNDLYTHAGADGSSRRYLLGDAPFIEWVSESNKISA
MVPSQHDVKDKLVVMKRNDPPTLRSSSSARSKDKVVVLRVSLHCKACEGKVRKHISKMEG
VTSFSIDMESKKVIIIGDVTPLGVLASVSKVKSAQLWPSSTSSSSLLLSSSSRPTSPWST


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for soybn_pan_p008062



Represented sequence(s):
SOYBN_Wm82_a2_v1.0
Glyma11g15400.2
SOYBN_ZH13
SoyZH13_11G139600.m1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
FvH4_3g34750.1 orthology 0.638 4 - -
Manes.04G029700.1 orthology 0.65 4 - -
Manes.11G135800.1 orthology 0.507 4 209 7.56e-68
cajca.ICPL87119.gnm1.ann1.C.cajan_21421.1 orthology 0.116 2 347 1.19e-122
maldo_pan_p016590 orthology 0.673 4 209 8.05e-68
maldo_pan_p031809 orthology 0.683 4 - -
phavu.G19833.gnm2.ann1.Phvul.011G068500.1 orthology 0.202 1 - -
phavu.G19833.gnm2.ann1.Phvul.011G068700.1 orthology 0.19 1 333 2.82e-117
soybn_pan_p029253 ultra-paralogy 0.0647 0 - -