Gene soybn_pan_p012384
| Sequence ID | soybn_pan_p012384 add to my list | ||
|---|---|---|---|
| Species | Glycine max | ||
| Alias | No gene alias | ||
| Pangenome status | Core (2/2) | ||
| Length | 407aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 407 amino acids
>soybn_pan_p012384_SOYBN MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDAEQQKVTVSGCVDS ATLIKKLVRAGKHAELWSQKTNQNQKQKNNNAKDDKNKGQKQALVRGLEAFKNQQKFPAF SSEEDEYYSEYDDDDDEDEDEEMRFLREKANQLQMLKQQAANANNARKGMGAIAAGSNNG KMNNGCNANSGKKGGPNHQNMGMKDSPNGRLDQKTMSALKLNNGHLGGEGLNLGEAKRAN DIGAMMNLAGFNGNNGANVGSATVLGGNNNSNGLGGFPVQSNNNMIPGSSASFSNGGGLS GGQYPSSLLMNMNGFNNHPSPSPLMMNMQQQARQAMMQQQPQMMYHRSPFVPPNTGYYYN HSSSYSPAHYSYSSYGLPGYPAAGGDDHHSAAHMFSDDNTSSSCSIM
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | GP023608 | Unannotated cluster |
| 3 | GP040483 | Unannotated cluster |
| 4 | GP070015 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for soybn_pan_p012384
Represented sequence(s):
SOYBN_Wm82_a2_v1.0
SOYBN_ZH13
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Cg2g033940.2 | orthology | 0.365 | 7 | 291 | 9.79e-96 |
| Cm053230.1 | orthology | 0.37 | 8 | 331 | 6e-111 |
| FvH4_4g32260.1 | orthology | 0.494 | 6 | 295 | 5.22e-97 |
| Manes.15G126600.1 | orthology | 0.44 | 7 | 330 | 1.37e-110 |
| Manes.17G075400.1 | orthology | 0.428 | 7 | - | - |
| cajca.ICPL87119.gnm1.ann1.C.cajan_07848.1 | orthology | 0.107 | 2 | 520 | 1.37e-185 |
| maldo_pan_p009716 | orthology | 0.429 | 6 | - | - |
| maldo_pan_p033106 | orthology | 0.462 | 6 | 285 | 3.3e-93 |
| orange1.1t04788.1 | orthology | 0.372 | 8 | 311 | 2.34e-103 |
| phavu.G19833.gnm2.ann1.Phvul.007G038000.1 | orthology | 0.101 | 1 | 536 | 8.35e-192 |
| soybn_pan_p023139 | ultra-paralogy | 0.0403 | 0 | - | - |
| thecc_pan_p016247 | orthology | 0.415 | 7 | 365 | 1.93e-124 |
| vitvi_pan_p018179 | orthology | 0.325 | 4 | 379 | 5.21e-130 |
| vitvi_pan_p040075 | orthology | 0.365 | 4 | - | - |