Gene soybn_pan_p020338


Sequence ID soybn_pan_p020338  add to my list
Species Glycine max
Alias No gene alias
Pangenome status Core (2/2)
Length 400aa



Length: 400 amino acids

>soybn_pan_p020338_SOYBN
MELWKLFVTALMPVLKVLLITAVGTFLALHRFNILRESARKHLNTIVYFVFTPALVCSIL
AKTTTFKSLVAVWFMPLNILLTFIIGTTLGWLFMKITKAPPDMQGLVLGCCAAGNLGNLP
LIIVPAVCKESSSPFGAVDVCNKKGMAYASLSMAVGHIYIWTFVYNIIRVYSCRIFNVNK
VDDSTVGPAAIETDLENYSTRPVVTAEDLSQTNDHEPKQKQTTNPLKTLVQKLNLKVLLA
PATIGSILGLIIGVVPPFQKMFVGDDAPLRVIEDSASMLGDASIPAITLLVGANLLDGLK
RSGMKLSLVVGIIVVRYIALPILGVGIVKGAIHFGLIHHDPLYQFILLLQYALPPAISIS
TITQLFGAGETECSIVMLATYVCASFSLTLWSTFFMWLVL


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP463693 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for soybn_pan_p020338



Represented sequence(s):
SOYBN_ZH13
SoyZH13_10G174100.m1
SOYBN_Wm82_a2_v1.0
Glyma10g33270.2
Glyma10g33280.2
Download sequences FASTA

  1. 2. 3.
1. Glyma10g33270.2 0.00 32.32 4.35
2. Glyma10g33280.2 32.32 0.00 38.54
3. SoyZH13_10G174100.m1 4.35 38.54 0.00